RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 COL5A3P25940 1745 aaPredicted RBP2.07□□□□□ -2.08
PRKDC-208ENST00000536710 MPDZO75970 2070 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 ADCY10Q96PN6 1610 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 CUL7Q14999 1698 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 STRCP1A6NGW2 1772 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 SDCBPO00560 298 aaPredicted RBP2.06□□□□□ -2.08
PRKDC-208ENST00000536710 GPX2P18283 190 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 AKR1C3P42330 323 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 CCL7P80098 99 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 REEP5Q00765 189 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 MOGQ16653 247 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 ARHGAP11BQ3KRB8 267 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 CLVS1Q8IUQ0 354 aaPredicted RBP2.06□□□□□ -2.08
PRKDC-208ENST00000536710 KRT222Q8N1A0 295 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 WFDC11Q8NEX6 87 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 ZNF563Q8TA94 476 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 C11orf40Q8WZ69 217 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 SCGB3A1Q96QR1 104 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 BAIAP2Q9UQB8 552 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 KIF24Q5T7B8 1368 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 MAPKBP1O60336 1514 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 DIP2BQ9P265 1576 aa2.06□□□□□ -2.08
PRKDC-208ENST00000536710 NCKAP5O14513 1909 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 IFNA10P01566 189 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 PMP2P02689 132 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 METTL15P1P0C7V9 234 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 UBBP0CG47 229 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 AAED1Q7RTV5 226 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 H1FXQ92522 213 aaKnown RBP2.05□□□□□ -2.08
PRKDC-208ENST00000536710 C14orf105Q9NVL8 296 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 FBXO5Q9UKT4 447 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 NUP155O75694 1391 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 FHAD1B1AJZ9 1412 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 PLXNA3P51805 1871 aa2.05□□□□□ -2.08
PRKDC-208ENST00000536710 TMEM210A6NLX4 147 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 ZNF80P51504 273 aaPredicted RBP2.04□□□□□ -2.08
PRKDC-208ENST00000536710 RUNX1Q01196 453 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 ELOBQ15370 118 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 TMEM97Q5BJF2 176 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 DHFR2Q86XF0 187 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 CT55Q8WUE5 264 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 MBD3L1Q8WWY6 194 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 CTTNBP2Q8WZ74 1663 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 DISP1Q96F81 1524 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 CHMP6Q96FZ7 201 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 Q96M85 177 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 MRPL32Q9BYC8 188 aaKnown RBP2.04□□□□□ -2.08
PRKDC-208ENST00000536710 SLC39A9Q9NUM3 307 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 MAP3K4Q9Y6R4 1608 aa2.04□□□□□ -2.08
PRKDC-208ENST00000536710 hADV38S2A0JD32 116 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 PDE6DO43924 150 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 FADS1O60427 444 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 ATP5HO75947 161 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 CTXN2P0C2S0 81 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 ZNF705BP0CI00 300 aaPredicted RBP2.03□□□□□ -2.08
PRKDC-208ENST00000536710 HIST1H3AP68431 136 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 MRPS15P82914 257 aaKnown RBP2.03□□□□□ -2.08
PRKDC-208ENST00000536710 H3F3AP84243 136 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 IAH1Q2TAA2 248 aaPredicted RBP2.03□□□□□ -2.08
PRKDC-208ENST00000536710 GDPD1Q8N9F7 314 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 PRAP1Q96NZ9 151 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 CKLFQ9UBR5 152 aa2.03□□□□□ -2.08
PRKDC-208ENST00000536710 GLI2P10070 1586 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 IQGAP2Q13576 1575 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 KIAA0586Q9BVV6 1533 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 ABCC10Q5T3U5 1492 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 TTC21AQ8NDW8 1320 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 IBA57-AS1B1ANH7 110 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 IFNA6P05013 189 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 RBP1P09455 135 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 ZNF345Q14585 488 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 AKIRIN2Q53H80 203 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 LCN15Q6UWW0 184 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 MIR17HGQ75NE6 70 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 RPS19BP1Q86WX3 136 aaKnown RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 OR51A2Q8NGJ7 313 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 DGCR14Q96DF8 476 aaKnown RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 BTF3L4Q96K17 158 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 SIGMAR1Q99720 223 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 NAA38Q9BRA0 125 aaKnown RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 RNASE7Q9H1E1 156 aaKnown RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 UQCC1Q9NVA1 299 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 KDM6BO15054 1643 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 KIAA0556O60303 1618 aa2.02□□□□□ -2.09
PRKDC-208ENST00000536710 ZCCHC11Q5TAX3 1644 aaKnown RBP2.02□□□□□ -2.09
PRKDC-208ENST00000536710 ABCC2Q92887 1545 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 UGGT2Q9NYU1 1516 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 UHRF1BP1LA0JNW5 1464 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 PRG4Q92954 1404 aaPredicted RBP2.01□□□□□ -2.09
PRKDC-208ENST00000536710 hCG_1818297A0A087WSY0 165 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 TRBV6-5A0A0K0K1A5 114 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 A8MT66 165 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 F8W036 122 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 RPSAP08865 295 aaKnown RBP2.01□□□□□ -2.09
PRKDC-208ENST00000536710 SMIM10L2AP0DMW4 78 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 SMIM10L2BP0DMW5 78 aa2.01□□□□□ -2.09
PRKDC-208ENST00000536710 MRPS25P82663 173 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms