RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
CAPRIN1-216ENST00000534042 CD5P06127 495 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 TGFBR1P36897 503 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 ERHP84090 104 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 PRCDQ00LT1 54 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 ZNF114Q8NC26 417 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 PINX1Q96BK5 328 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 AGRNO00468 2067 aa12.37□□□□□ -0.43
CAPRIN1-216ENST00000534042 DNASE2O00115 360 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-216ENST00000534042 RPS19P39019 145 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-216ENST00000534042 HSPE1P61604 102 aaKnown RBP12.36□□□□□ -0.43
CAPRIN1-216ENST00000534042 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 CA1P00915 261 aaPredicted RBP12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 IGKV1-39P01597 117 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 IGKV1D-39P04432 117 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 TMEM187Q14656 261 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 DUSP18Q8NEJ0 188 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 GPX8Q8TED1 209 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 ST8SIA2Q92186 375 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
CAPRIN1-216ENST00000534042 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 DFFBO76075 338 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 NPBWR1P48145 328 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 DEFB131AP59861 70 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 RPL11P62913 178 aaKnown RBP12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 KCTD21Q4G0X4 260 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 C2CD4CQ8TF44 421 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 KRTAP17-1Q9BYP8 105 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
CAPRIN1-216ENST00000534042 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 DEFB4AO15263 64 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 APOHP02749 345 aaPredicted RBP12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 SNCAP37840 140 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 UCP3P55916 312 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 LEMD1Q68G75 181 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 ZNF600Q6ZNG1 722 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 LILRB2Q8N423 598 aa12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 PUS1Q9Y606 427 aaKnown RBP eCLIP12.33□□□□□ -0.44
CAPRIN1-216ENST00000534042 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 IGHV3-66A0A0C4DH42 116 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 TCTAP57738 103 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 TMEM231Q9H6L2 316 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 SCPEP1Q9HB40 452 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 FRAS1Q86XX4 4008 aa12.32□□□□□ -0.44
CAPRIN1-216ENST00000534042 TMEM50AO95807 157 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 RCVRNP35243 200 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 STHQ8IWL8 128 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 SLC35G3Q8N808 338 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 ZFAND3Q9H8U3 227 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
CAPRIN1-216ENST00000534042 A0A1W2PS18 150 aa12.3□□□□□ -0.44
CAPRIN1-216ENST00000534042 APOA1P02647 267 aa12.3□□□□□ -0.44
CAPRIN1-216ENST00000534042 NPPCP23582 126 aa12.3□□□□□ -0.44
CAPRIN1-216ENST00000534042 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
CAPRIN1-216ENST00000534042 A0A1B0GU03 582 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 CORTO00230 105 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 IFNA17P01571 189 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PGAM2P15259 253 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 AKR1C2P52895 323 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PRR20EP86478 221 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PRR20CP86479 221 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PRR20DP86480 221 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PRR20BP86481 221 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PRR20AP86496 221 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 VCX3AQ9NNX9 186 aa12.29□□□□□ -0.44
CAPRIN1-216ENST00000534042 IGLL5B9A064 214 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 C11orf94C9JXX5 98 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 INS-IGF2F8WCM5 200 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 M0QYG6 137 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 ATG12O94817 140 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 RND3P61587 244 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 Q8NAQ8 132 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 METTL26Q96S19 204 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 HRH4Q9H3N8 390 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
CAPRIN1-216ENST00000534042 A0A0B4J293 547 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 SCGB2A1O75556 95 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 PI3P19957 117 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 ETV6P41212 452 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 HOXA1P49639 335 aaPredicted RBP12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 PIGPP57054 158 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 TMEM41BQ5BJD5 291 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 PVRIGQ6DKI7 326 aa12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 MORN3Q6PF18 240 aaPredicted RBP12.27□□□□□ -0.45
CAPRIN1-216ENST00000534042 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms