RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
COPB1-210ENST00000533533 SRSF8Q9BRL6 282 aaKnown RBP6.65□□□□□ -1.34
COPB1-210ENST00000533533 ZC4H2Q9NQZ6 224 aa6.65□□□□□ -1.34
COPB1-210ENST00000533533 THYN1Q9P016 225 aa6.65□□□□□ -1.34
COPB1-210ENST00000533533 CACNG5Q9UF02 275 aa6.65□□□□□ -1.34
COPB1-210ENST00000533533 FLVCR2Q9UPI3 526 aa6.65□□□□□ -1.34
COPB1-210ENST00000533533 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 A0A0B4J293 547 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 CEBPZOSA8MTT3 80 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 A8MZ25 164 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 PPP5D1E7EU14 171 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 LYRM1O43325 122 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 NDUFB6O95139 128 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 SNCAP37840 140 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 SRPXP78539 464 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 PRCDQ00LT1 54 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 PPP1R1AQ13522 171 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 ZNF846Q147U1 533 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 TATDN3Q17R31 274 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 TMEM128Q5BJH2 165 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 LYZL2Q7Z4W2 148 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 FAM219AQ8IW50 185 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 CADM3Q8N126 398 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 Q8N1Y9 231 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 UBAC2Q8NBM4 344 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 PINX1Q96BK5 328 aaKnown RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 GPR146Q96CH1 333 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 GALNT14Q96FL9 552 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 CXorf58Q96LI9 332 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 OR4C12Q96R67 309 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 C7orf50Q9BRJ6 194 aaKnown RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 ELOVL1Q9BW60 279 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 WDR12Q9GZL7 423 aaKnown RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 C19orf73Q9NVV2 129 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 F11RQ9Y624 299 aaKnown RBP6.64□□□□□ -1.35
COPB1-210ENST00000533533 TMEM56-RWDD3S4R434 201 aa6.64□□□□□ -1.35
COPB1-210ENST00000533533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.63□□□□□ -1.35
COPB1-210ENST00000533533 MFSD2BA6NFX1 497 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 HLA-AP01891 365 aaKnown RBP6.63□□□□□ -1.35
COPB1-210ENST00000533533 HOXB5P09067 269 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 P0C879 139 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 SULT1A3P0DMM9 295 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 SULT1A4P0DMN0 295 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 ANXA7P20073 488 aaKnown RBP6.63□□□□□ -1.35
COPB1-210ENST00000533533 GPR183P32249 361 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 ARL3P36405 182 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 SYNJ2BPP57105 145 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 C4orf46Q504U0 113 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 Q56UQ5 140 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 Q6ZRM9 215 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 LINC00299Q6ZSB3 139 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 OR2C3Q8N628 320 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 OR1L6Q8NGR2 347 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 OR1S1Q8NH92 325 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 IL22RA2Q969J5 263 aa6.63□□□□□ -1.35
COPB1-210ENST00000533533 HEYLQ9NQ87 328 aaPredicted RBP6.63□□□□□ -1.35
COPB1-210ENST00000533533 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 TRBV7-1A0A0A6YYK4 115 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 A0A0B4J2A0 478 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 PIGBOS1A0A0B4J2F0 54 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 ZNF320A2RRD8 509 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 BMPR1BO00238 502 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 PLA2G10O15496 165 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 GGCTO75223 188 aaKnown RBP6.62□□□□□ -1.35
COPB1-210ENST00000533533 OR2C1O95371 312 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SFT2D2O95562 160 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 IGLV1-51P01701 117 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 CLEC3BP05452 202 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 BTCP35070 178 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.35
COPB1-210ENST00000533533 MFAP2P55001 183 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SPCS3P61009 180 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SMCO1Q147U7 214 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 ANKRD55Q3KP44 614 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 FAM209BQ5JX69 171 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 MZT2BQ6NZ67 158 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 HAPLN4Q86UW8 402 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 OR1P1Q8NH06 330 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 PGPEP1Q9NXJ5 209 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 SHPKQ9UHJ6 478 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
COPB1-210ENST00000533533 IGHV3-35A0A0C4DH35 117 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 FAM240BA0A1B0GVZ2 78 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 C9orf170A2RU37 121 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 OR2T8A6NH00 312 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 MT-CO2P00403 227 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 OR4E1P0C645 316 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 KLF5Q13887 457 aaPredicted RBP6.61□□□□□ -1.35
COPB1-210ENST00000533533 HAGHQ16775 308 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 UXS1Q8NBZ7 420 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 OR9G4Q8NGQ1 327 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 COQ8AQ8NI60 647 aa6.61□□□□□ -1.35
COPB1-210ENST00000533533 ZNF502Q8TBZ5 544 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms