RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 BAP18Q8IXM2 172 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 TMEM86BQ8N661 226 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 TMEM147Q9BVK8 224 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 ZNF680Q8NEM1 530 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 RNASEH2CQ8TDP1 164 aaKnown RBP12.55□□□□□ -0.4
TRIM3-213ENST00000533309 GGACTQ9BVM4 153 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
TRIM3-213ENST00000533309 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 MAST4O15021 2626 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 UBE2L5PA0A1B0GUS4 154 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 G3V318 75 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 IGF1P05019 195 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 SRD5A1P18405 259 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
TRIM3-213ENST00000533309 CD69Q07108 199 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 EXOSC2Q13868 293 aaKnown RBP12.54□□□□□ -0.4
TRIM3-213ENST00000533309 MLANAQ16655 118 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 UNQ5815/PRO19632Q6UWF5 114 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
TRIM3-213ENST00000533309 RGS13O14921 159 aa12.53□□□□□ -0.4
TRIM3-213ENST00000533309 PRH1P02810 166 aa12.53□□□□□ -0.4
TRIM3-213ENST00000533309 ALKAL2Q6UX46 152 aa12.53□□□□□ -0.4
TRIM3-213ENST00000533309 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
TRIM3-213ENST00000533309 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
TRIM3-213ENST00000533309 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
TRIM3-213ENST00000533309 FANCD2OSQ96PS1 177 aa12.53□□□□□ -0.4
TRIM3-213ENST00000533309 PARD6GQ9BYG4 376 aaPredicted RBP12.53□□□□□ -0.4
TRIM3-213ENST00000533309 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
TRIM3-213ENST00000533309 IGLV11-55A0A075B6I3 123 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 INAFM1C9JVW0 142 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.4
TRIM3-213ENST00000533309 RUNX1Q01196 453 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 SCGB2A2Q13296 93 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 TREML4Q6UXN2 200 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 SLC16A13Q7RTY0 426 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 OR5T1Q8NG75 326 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 MISP3Q96FF7 219 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 LINC00527Q9UJ94 153 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 RFNGQ9Y644 331 aa12.52□□□□□ -0.4
TRIM3-213ENST00000533309 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 SOX15O60248 233 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 IFNA5P01569 189 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 DEFA4P12838 97 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
TRIM3-213ENST00000533309 OPRK1P41145 380 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 GAMTQ14353 236 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 KLK9Q2XQG4 91 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 TMEM95Q3KNT9 176 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 SLC25A24Q6NUK1 477 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRIM3-213ENST00000533309 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 MRPL36Q9P0J6 103 aaKnown RBP12.51□□□□□ -0.41
TRIM3-213ENST00000533309 KLK9Q9UKQ9 250 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 WDR83OSQ9Y284 106 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 SMCO3A2RU48 225 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 I3L2K1 104 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 CORTO00230 105 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 SPP1P10451 314 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 OR1L6Q8NGR2 347 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 NOL4LQ96MY1 436 aaPredicted RBP12.51□□□□□ -0.41
TRIM3-213ENST00000533309 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 ZNF580Q9UK33 172 aa12.51□□□□□ -0.41
TRIM3-213ENST00000533309 LSM4Q9Y4Z0 139 aaKnown RBP12.51□□□□□ -0.41
TRIM3-213ENST00000533309 K7EIM0 57 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 AP4M1O00189 453 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 MT-CO2P00403 227 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 IFNA7P01567 189 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 IGHV3-48P01763 117 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 FGF7P21781 194 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 RSG1Q9BU20 258 aa12.5□□□□□ -0.41
TRIM3-213ENST00000533309 TEP1Q99973 2627 aaKnown RBP12.5□□□□□ -0.41
TRIM3-213ENST00000533309 IGKV1OR2-108A0A075B7D4 117 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 CLDN34H7C241 214 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 AKR1C1Q04828 323 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 FAM74A1Q5RGS3 127 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 ZNF767PQ75MW2 155 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
TRIM3-213ENST00000533309 NPVFQ9HCQ7 196 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms