RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 IGKV1D-33P01593 117 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 IGKV1-33P01594 117 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 HSPE1P61604 102 aaKnown RBP7.35□□□□□ -1.23
CTNND1-232ENST00000532649 PAX2Q02962 417 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 WDR82Q6UXN9 313 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 VCX2Q9H322 139 aa7.35□□□□□ -1.23
CTNND1-232ENST00000532649 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 ZG16O60844 167 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 CKS1BP61024 79 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 EFNB1P98172 346 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 ARPC1AQ92747 370 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 IGHV3-49A0A0A0MS15 119 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 TRAV8-6A0A0B4J262 113 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 RPL39P5Q59GN2 51 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 LINC00305Q7Z4B0 112 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 STPG2Q8N412 459 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 DRAM1Q8N682 238 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 CBLN4Q9NTU7 201 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 IGHV3-35A0A0C4DH35 117 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 ARL14EPLP0DKL9 152 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 RUNX1Q01196 453 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 DTX1Q86Y01 620 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 ZNF414Q96IQ9 312 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 RTTNQ86VV8 2226 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 ERVK11-1P61568 191 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 C9orf62Q8N4C0 152 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 TMEM252Q8N6L7 170 aa7.34□□□□□ -1.23
CTNND1-232ENST00000532649 LYPD3O95274 346 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 IGHV4-39P01824 125 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 IFITM3Q01628 133 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 LRTM2Q8N967 370 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 IGHV1-18A0A0C4DH31 117 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 SOD3P08294 240 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 GGNQ86UU5 652 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 ZCCHC24Q8N2G6 241 aaKnown RBP7.33□□□□□ -1.24
CTNND1-232ENST00000532649 NEUROG1Q92886 237 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 TYMSP04818 313 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 IFI27P40305 119 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-232ENST00000532649 CHCHD5Q9BSY4 110 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 MSRB2Q9Y3D2 182 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 MDC1Q14676 2089 aaKnown RBP7.33□□□□□ -1.24
CTNND1-232ENST00000532649 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 TRBV9A0A0B4J1U6 114 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 PEX7O00628 323 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 MOSP00540 346 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 GNLYP22749 145 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 TIMP3P35625 211 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 TM4SF5O14894 197 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 EFNA2O43921 213 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 SAP30O75446 220 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 NDUFA3O95167 84 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 GPR183P32249 361 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 CYP2G1PQ6ZSU1 146 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 BIVMQ86UB2 503 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
CTNND1-232ENST00000532649 PEF1Q9UBV8 284 aaKnown RBP7.33□□□□□ -1.24
CTNND1-232ENST00000532649 HEATR5BQ9P2D3 2071 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TGIF2-C20orf24A0A0A6YYL0 155 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TNFRSF9Q07011 255 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TTC9CQ8N5M4 171 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 DPM3Q9P2X0 92 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 FOXA2Q9Y261 457 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-232ENST00000532649 NEUROG3Q9Y4Z2 214 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 LHBP01229 141 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 CD7P09564 240 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 UCP3P55916 312 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 ZNF345Q14585 488 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 ICAM4Q14773 271 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 WBP1Q96G27 269 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 A0A1B0GTI1 187 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 CLPSP04118 112 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 SRIP30626 198 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 RNF182Q8N6D2 247 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TM2D1Q9BX74 207 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 JPT2Q9H910 190 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TCF19Q9Y242 345 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 GGTLC3B5MD39 225 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TOMM40O96008 361 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-232ENST00000532649 MST1P26927 711 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 MDS2Q8NDY4 140 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 CACNA1GO43497 2377 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 PQLC2LA1A4F0 135 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 CRYBB3P26998 211 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 LINC00158P58513 81 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 FAM71F2Q6NXP2 309 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 OR1P1Q8NH06 330 aa7.32□□□□□ -1.24
CTNND1-232ENST00000532649 TSC2P49815 1807 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 SHISA3A0PJX4 238 aa7.31□□□□□ -1.24
CTNND1-232ENST00000532649 LYNX1G3V0Z9 82 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms