RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 CENPSQ8N2Z9 138 aa11.18□□□□□ -0.62
BRPF3-210ENST00000532538 TXN2Q99757 166 aa11.18□□□□□ -0.62
BRPF3-210ENST00000532538 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 SMIM31A0A1B0GVY4 71 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 TMEM127O75204 238 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 SMIM18P0DKX4 95 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 LSM3P62310 102 aaKnown RBP11.17□□□□□ -0.62
BRPF3-210ENST00000532538 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 TBC1D26Q86UD7 250 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 STHQ8IWL8 128 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 C2CD4CQ8TF44 421 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 NXF2Q9GZY0 626 aaKnown RBP11.17□□□□□ -0.62
BRPF3-210ENST00000532538 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
BRPF3-210ENST00000532538 AGRNO00468 2067 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 I3L2K1 104 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 CD5P06127 495 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 TGFBR1P36897 503 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 SNCAP37840 140 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 NPBWR1P48145 328 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 DEFB131AP59861 70 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
BRPF3-210ENST00000532538 IGLL5B9A064 214 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 PGAM2P15259 253 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 GPR141Q7Z602 305 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 CADM3Q8N126 398 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 SLC35G3Q8N808 338 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 OR10C1Q96KK4 312 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
BRPF3-210ENST00000532538 DFFBO76075 338 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 IFNA17P01571 189 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 NAT1P18440 290 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
BRPF3-210ENST00000532538 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
BRPF3-210ENST00000532538 TOMM20LQ6UXN7 152 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 ZNF600Q6ZNG1 722 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 SEC22AQ96IW7 307 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 FUNDC2Q9BWH2 189 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 C11orf68Q9H3H3 251 aaKnown RBP11.14□□□□□ -0.63
BRPF3-210ENST00000532538 ENY2Q9NPA8 101 aa11.14□□□□□ -0.63
BRPF3-210ENST00000532538 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
BRPF3-210ENST00000532538 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 AKR1C2P52895 323 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRPF3-210ENST00000532538 FAM90A2PQ658T7 463 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 LYSMD2Q8IV50 215 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 STXBP6Q8NFX7 210 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 RNASE11Q8TAA1 199 aaKnown RBP11.13□□□□□ -0.63
BRPF3-210ENST00000532538 TMEM230Q96A57 120 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
BRPF3-210ENST00000532538 COMMD3Q9UBI1 195 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 ANAPC10Q9UM13 185 aa11.13□□□□□ -0.63
BRPF3-210ENST00000532538 A0A1W2PS18 150 aa11.12□□□□□ -0.63
BRPF3-210ENST00000532538 APOHP02749 345 aaPredicted RBP11.12□□□□□ -0.63
BRPF3-210ENST00000532538 NPPCP23582 126 aa11.12□□□□□ -0.63
BRPF3-210ENST00000532538 RPL5P46777 297 aaKnown RBP11.12□□□□□ -0.63
BRPF3-210ENST00000532538 ALDH3B2P48448 385 aa11.12□□□□□ -0.63
BRPF3-210ENST00000532538 HOXA1P49639 335 aaPredicted RBP11.12□□□□□ -0.63
BRPF3-210ENST00000532538 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
BRPF3-210ENST00000532538 FAM212BQ9NTI7 297 aaPredicted RBP11.12□□□□□ -0.63
BRPF3-210ENST00000532538 ATG12O94817 140 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 RCVRNP35243 200 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 OPRK1P41145 380 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 TCTAP57738 103 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 IZUMO4Q1ZYL8 232 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 METTL26Q96S19 204 aa11.11□□□□□ -0.63
BRPF3-210ENST00000532538 C11orf94C9JXX5 98 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 M0QYG6 137 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 CORTO00230 105 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 NOL3O60936 208 aaKnown RBP11.1□□□□□ -0.63
BRPF3-210ENST00000532538 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 TRIM16LQ309B1 348 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 GPX8Q8TED1 209 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 ZNF414Q96IQ9 312 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 KRTAP17-1Q9BYP8 105 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 VSIRQ9H7M9 311 aa11.1□□□□□ -0.63
BRPF3-210ENST00000532538 FAM25AB3EWG3 89 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 FAM25CB3EWG5 89 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 FAM25GB3EWG6 89 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 GABARAPO95166 117 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 TMEM50AO95807 157 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 PI3P19957 117 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 UCP3P55916 312 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 SCPEP1Q9HB40 452 aa11.09□□□□□ -0.63
BRPF3-210ENST00000532538 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms