RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 I3L2K1 104 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 LPCAT3Q6P1A2 487 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 TXN2Q99757 166 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 RABAC1Q9UI14 185 aa11.62□□□□□ -0.55
CHMP4A-204ENST00000530996 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 TMEM187Q14656 261 aa11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 LEMD1Q68G75 181 aa11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 CADM3Q8N126 398 aa11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 ST8SIA2Q92186 375 aa11.61□□□□□ -0.55
CHMP4A-204ENST00000530996 CD5P06127 495 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 NAT1P18440 290 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 SNCAP37840 140 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 NPBWR1P48145 328 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 DEFB131AP59861 70 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 SNX29P2Q8IUI4 249 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 STHQ8IWL8 128 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 ZNF114Q8NC26 417 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 SEC22AQ96IW7 307 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 TMEM231Q9H6L2 316 aa11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP4A-204ENST00000530996 PGAM2P15259 253 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 HOXA1P49639 335 aaPredicted RBP11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 AKR1C2P52895 323 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 DUSP18Q8NEJ0 188 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 ZNF414Q96IQ9 312 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 PDCD10Q9BUL8 212 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 VCX3AQ9NNX9 186 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 FRAS1Q86XX4 4008 aa11.59□□□□□ -0.55
CHMP4A-204ENST00000530996 SMIM31A0A1B0GVY4 71 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 DFFBO76075 338 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 IGKV1-39P01597 117 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 IGKV1D-39P04432 117 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 RCVRNP35243 200 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 HSPE1P61604 102 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 IZUMO4Q1ZYL8 232 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 KCTD21Q4G0X4 260 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 RNASE12Q5GAN4 147 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM90A2PQ658T7 463 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 TOMM20LQ6UXN7 152 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 ZNF600Q6ZNG1 722 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM212BQ9NTI7 297 aaPredicted RBP11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 COMMD3Q9UBI1 195 aa11.58□□□□□ -0.56
CHMP4A-204ENST00000530996 IGLL5B9A064 214 aa11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 IFNA17P01571 189 aa11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 APOHP02749 345 aaPredicted RBP11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 NARS2Q96I59 477 aaKnown RBP11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
CHMP4A-204ENST00000530996 M0QYG6 137 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 OPRK1P41145 380 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 SCPEP1Q9HB40 452 aa11.56□□□□□ -0.56
CHMP4A-204ENST00000530996 CORTO00230 105 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PI3P19957 117 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 NPPCP23582 126 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PPP5CP53041 499 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PRR20EP86478 221 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PRR20CP86479 221 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PRR20DP86480 221 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PRR20BP86481 221 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 PRR20AP86496 221 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 TRIM16LQ309B1 348 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 METTL26Q96S19 204 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 KMT2AQ03164 3969 aa11.55□□□□□ -0.56
CHMP4A-204ENST00000530996 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 A0A1W2PS18 150 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 ATG12O94817 140 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 SUB1P53999 127 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 UCP3P55916 312 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 TCTAP57738 103 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 KRTAP17-1Q9BYP8 105 aa11.54□□□□□ -0.56
CHMP4A-204ENST00000530996 A0A1B0GU03 582 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 KNCNA6PVL3 124 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 IGKV1-5P01602 117 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 APOA1P02647 267 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 P2RY1P47900 373 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 PIGPP57054 158 aa11.53□□□□□ -0.56
CHMP4A-204ENST00000530996 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms