RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CCNOP22674 350 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 SNRNP40Q96DI7 357 aaKnown RBP11.64□□□□□ -0.55
PCF11-204ENST00000530660 KCNIP1Q9NZI2 227 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 NCR2O95944 276 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 CFHR1Q03591 330 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 TCTEX1D4Q5JR98 221 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 TRAPPC2LQ9UL33 140 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 FREM2Q5SZK8 3169 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 TET2Q6N021 2002 aaPredicted RBP11.63□□□□□ -0.55
PCF11-204ENST00000530660 ZIC3O60481 467 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 DHRS13Q6UX07 377 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 MBD6Q96DN6 1003 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 SPAG8Q99932 426 aaPredicted RBP11.63□□□□□ -0.55
PCF11-204ENST00000530660 SPATA25Q9BR10 227 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
PCF11-204ENST00000530660 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 DOCK7Q96N67 2140 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 MPDU1O75352 247 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 CCL2P13500 99 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 PRAMEF5Q5TYX0 476 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 PRAMEF6Q5VXH4 476 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 C18orf15Q96N68 181 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 CSN3P07498 182 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 INSL3P51460 131 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 C5orf64Q2M2E5 130 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 RNF138Q8WVD3 245 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
PCF11-204ENST00000530660 IDI2-AS1Q9NZ38 188 aa11.62□□□□□ -0.55
PCF11-204ENST00000530660 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 MT-CO3P00414 261 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 ZNF137PP52743 207 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 ETDBQ3ZM63 59 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 LINC00470Q9BZP3 86 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 CHRNA10Q9GZZ6 450 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
PCF11-204ENST00000530660 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 LINC01545Q5VT33 79 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 FGF21Q9NSA1 209 aa11.61□□□□□ -0.55
PCF11-204ENST00000530660 IGLV3-32A0A0A0MS00 114 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 LIPFP07098 398 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 OR9G9P0C7N8 305 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 FA2HQ7L5A8 372 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 KLF7O75840 302 aaPredicted RBP11.6□□□□□ -0.55
PCF11-204ENST00000530660 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
PCF11-204ENST00000530660 ZNF503Q96F45 646 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 ZNF479Q96JC4 524 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 PLEKHA3Q9HB20 300 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
PCF11-204ENST00000530660 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 CER1O95813 267 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 ARPC1AQ92747 370 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 OR2H1Q9GZK4 316 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 SH2D2AQ9NP31 389 aa11.6□□□□□ -0.55
PCF11-204ENST00000530660 FAM186AA6NE01 2351 aa11.59□□□□□ -0.55
PCF11-204ENST00000530660 K7ERJ3 54 aa11.59□□□□□ -0.55
PCF11-204ENST00000530660 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
PCF11-204ENST00000530660 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
PCF11-204ENST00000530660 VKORC1L1Q8N0U8 176 aa11.59□□□□□ -0.55
PCF11-204ENST00000530660 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
PCF11-204ENST00000530660 BOKQ9UMX3 212 aaPredicted RBP11.59□□□□□ -0.55
PCF11-204ENST00000530660 A1L4Q6 167 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 LINC00473A8K010 186 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 C10orf142B7Z368 130 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 IGHV3-7P01780 117 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 MRPS21P82921 87 aaKnown RBP11.58□□□□□ -0.55
PCF11-204ENST00000530660 ZNF645Q8N7E2 425 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 SGK494Q96LW2 274 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.55
PCF11-204ENST00000530660 VGLL1Q99990 258 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 LSM4Q9Y4Z0 139 aaKnown RBP11.58□□□□□ -0.55
PCF11-204ENST00000530660 MPC1Q9Y5U8 109 aa11.58□□□□□ -0.55
PCF11-204ENST00000530660 PRSS46E5RG02 174 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 TSPAN13O95857 204 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 B4GALT7Q9UBV7 327 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 IGHV3-64DA0A0J9YX35 117 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 J3QR89 54 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 K7EMI3 77 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 ABHD17AQ96GS6 310 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
PCF11-204ENST00000530660 IGHV1OR21-1A0A087WYE8 117 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 FAM87AP0C7U9 286 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 RAC3P60763 192 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 FADS6Q8N9I5 356 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms