RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HIST2H2BEQ16778 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.27□□□□□ -2.05
C11orf88-204ENST00000529661 SPATA12Q7Z6I5 190 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 EXOC3-AS1Q8N2X6 119 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 OR9Q1Q8NGQ5 310 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 MUC7Q8TAX7 377 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 RPS4Y2Q8TD47 263 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 H1FXQ92522 213 aaKnown RBP2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BHQ93079 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 TCEAL4Q96EI5 215 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BNQ99877 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H2BMQ99879 126 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 CCDC32Q9BV29 185 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 SMDT1Q9H4I9 107 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 ASF1BQ9NVP2 202 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 IL36BQ9NZH7 164 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 JPT1Q9UK76 154 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 AMMECR1Q9Y4X0 333 aaPredicted RBP2.27□□□□□ -2.05
C11orf88-204ENST00000529661 COL18A1P39060 1754 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
C11orf88-204ENST00000529661 IGKV1D-43A0A0B4J1Z2 117 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 EFCAB10A6NFE3 127 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 ARL5CA6NH57 179 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 GGTLC3B5MD39 225 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 LY6HO94772 140 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 P0C880 135 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 S100A7P31151 101 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 CSN1S1P47710 185 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 PSMD8P48556 350 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 FXYD7P58549 80 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 TAS2R30P59541 319 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 HIST1H4AP62805 103 aaKnown RBP2.26□□□□□ -2.05
C11orf88-204ENST00000529661 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
C11orf88-204ENST00000529661 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 LYRM7Q5U5X0 104 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 TCF24Q7RTU0 167 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 OR5J2Q8NH18 312 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 CLDND2Q8NHS1 167 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 MGLLQ99685 303 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 FAM107BQ9H098 131 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 GSKIPQ9P0R6 139 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 FUT9Q9Y231 359 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 ZSWIM8A7E2V4 1837 aa2.26□□□□□ -2.05
C11orf88-204ENST00000529661 CCDC88AQ3V6T2 1871 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 ANKRD31Q8N7Z5 1873 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 TRAV41A0A0B4J266 112 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 DUXBA0A1W2PPF3 345 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 CLDN25C9JDP6 229 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 FAM107AO95990 144 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 NPYP01303 97 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 IGHV1-69P01742 117 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 GPX2P18283 190 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 DEFA3P59666 94 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 AKR1C1Q04828 323 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 LTC4SQ16873 150 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 DEFB134Q4QY38 66 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 AADACL3Q5VUY0 350 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 ZNF322Q6U7Q0 402 aaPredicted RBP2.25□□□□□ -2.05
C11orf88-204ENST00000529661 LCA10Q71F78 164 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 ANGPTL5Q86XS5 388 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 PACRGLQ8N7B6 248 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 CNEP1R1Q8N9A8 125 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 Q8NAQ8 132 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 ST6GALNAC3Q8NDV1 305 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 THEM6Q8WUY1 208 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 MBD3L1Q8WWY6 194 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 DERL1Q9BUN8 251 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 RTL8AQ9BWD3 113 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 AICDAQ9GZX7 198 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 RASL12Q9NYN1 266 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
C11orf88-204ENST00000529661 IGHV3-73A0A0B4J1V6 119 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 A0A1B0GU33 70 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 C19orf84I3L1E1 186 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 LEPROTO15243 131 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 ZNF73O43830 326 aaPredicted RBP2.24□□□□□ -2.05
C11orf88-204ENST00000529661 BANF1O75531 89 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 CASP1P29466 404 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 CD200P41217 278 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 ZNF80P51504 273 aaPredicted RBP2.24□□□□□ -2.05
C11orf88-204ENST00000529661 EMP1P54849 157 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 AP1S1P61966 158 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 PSPHP78330 225 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 RPL18Q07020 188 aaKnown RBP2.24□□□□□ -2.05
C11orf88-204ENST00000529661 BAMBIQ13145 260 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 HTR4Q13639 388 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 SPCS2Q15005 226 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 TMEM86AQ8N2M4 240 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 SMCR5Q8TEV8 140 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 LZICQ8WZA0 190 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 ADAT3Q96EY9 351 aaPredicted RBP2.24□□□□□ -2.05
C11orf88-204ENST00000529661 CAPZA3Q96KX2 299 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 CCDC115Q96NT0 180 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 DOHHQ9BU89 302 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms