RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TRAV2A0A0B4J234 112 aa12.87□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 APOA1P02647 267 aa12.87□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 TFPI2P48307 235 aa12.87□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 FAM90A2PQ658T7 463 aa12.87□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 DUSP18Q8NEJ0 188 aa12.87□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 CORTO00230 105 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 ATG12O94817 140 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 TCTAP57738 103 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 ZNF486Q96H40 463 aaPredicted RBP12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 INS-IGF2F8WCM5 200 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 ST8SIA3O43173 380 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 IGKV1-39P01597 117 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 IGKV1D-39P04432 117 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 IFNA4P05014 189 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 TGFBR1P36897 503 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 SNCAP37840 140 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 RND3P61587 244 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 RBMS2Q15434 407 aaKnown RBP12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 ZNF600Q6ZNG1 722 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 OR11H2Q8NH07 326 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 C11orf45Q8TAV5 145 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 A0A087WXM4 84 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 PDCD10Q9BUL8 212 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 COMMD3Q9UBI1 195 aa12.84□□□□□ -0.35
CKLF-CMTM1-202ENST00000527845 A0A1W2PS18 150 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 AKR1C2P52895 323 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 LSM3P62310 102 aaKnown RBP12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TMEM187Q14656 261 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ZNF124Q15973 351 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 SNX29P2Q8IUI4 249 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 GBGT1Q8N5D6 347 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ST8SIA2Q92186 375 aa12.83□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 IGHV3OR16-13A0A075B7E8 117 aa12.82□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 IGHV3-74A0A0B4J1X5 117 aa12.82□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TNFAIP8O95379 198 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 IFNA17P01571 189 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 PGAM2P15259 253 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TBPP20226 339 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RNASE10Q5GAN6 216 aaKnown RBP12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 STHQ8IWL8 128 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ARRDC1Q8N5I2 433 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RPP25LQ8N5L8 163 aaKnown RBP12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 C2CD4CQ8TF44 421 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 NARS2Q96I59 477 aaKnown RBP12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ENY2Q9NPA8 101 aa12.81□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 C11orf94C9JXX5 98 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TMEM50AO95807 157 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 NPPCP23582 126 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 PIGPP57054 158 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 DEFB131AP59861 70 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 NANOS2P60321 138 aaKnown RBP12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 MORN3Q6PF18 240 aaPredicted RBP12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 CCDC71LQ8N9Z2 235 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 METTL26Q96S19 204 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 P0C879 139 aa12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 SPP1P10451 314 aa12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 EIF2B2P49770 351 aaKnown RBP12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 LHFPL1Q86WI0 220 aa12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RABAC1Q9UI14 185 aa12.79□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 TRAV30A0A087WSZ9 112 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 C3orf85A0A1B0GTC6 90 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 M0QYG6 137 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 CLN5O75503 358 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 DEDDO75618 318 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 IGKV1-5P01602 117 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 APOHP02749 345 aaPredicted RBP12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RNASE2P10153 161 aaKnown RBP12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ELK1P19419 428 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 OPRK1P41145 380 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 RPL5P46777 297 aaKnown RBP12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 SPINK9Q5DT21 86 aa12.78□□□□□ -0.36
CKLF-CMTM1-202ENST00000527845 ZFAND1Q8TCF1 268 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms