RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
SSRP1-203ENST00000526696 TPRKBQ9Y3C4 175 aa9.39□□□□□ -0.91
SSRP1-203ENST00000526696 AK6Q9Y3D8 172 aaKnown RBP9.39□□□□□ -0.91
SSRP1-203ENST00000526696 V9GY05 133 aa9.39□□□□□ -0.91
SSRP1-203ENST00000526696 A0A087WXM4 84 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 MLLT11Q13015 90 aaPredicted RBP9.38□□□□□ -0.91
SSRP1-203ENST00000526696 ARL6IP1Q15041 203 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 TOMM20LQ6UXN7 152 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 STXBP6Q8NFX7 210 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 DCANP1Q8TF63 244 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 TMEM203Q969S6 136 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 NXF2Q9GZY0 626 aaKnown RBP9.38□□□□□ -0.91
SSRP1-203ENST00000526696 Q9H3A6 140 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 ACOT13Q9NPJ3 140 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 PTTG2Q9NZH5 202 aa9.38□□□□□ -0.91
SSRP1-203ENST00000526696 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
SSRP1-203ENST00000526696 IGKV1D-13A0A0B4J2D9 117 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 TEX48A0A1B0GUV7 120 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 RPS10-NUDT3A0A1W2PQS6 291 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 UPK2O00526 184 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 NUDT3O95989 172 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 IGKV1-13P0DP09 117 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 RAB6AP20340 208 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 CCL18P55774 89 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 ZNF773Q6PK81 442 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 OR10R2Q8NGX6 335 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 QTRT1Q9BXR0 403 aaKnown RBP9.37□□□□□ -0.91
SSRP1-203ENST00000526696 HRASLSQ9HDD0 168 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 SPATA2Q9UM82 520 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
SSRP1-203ENST00000526696 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 TMEM272A0A1B0GTI8 110 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 SMIM9A6NGZ8 99 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 A6NHS1 94 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 MFNGO00587 321 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 SLC22A5O76082 557 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 HRASP01112 189 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
SSRP1-203ENST00000526696 HIST1H1DP16402 221 aaKnown RBP9.36□□□□□ -0.91
SSRP1-203ENST00000526696 CALRP27797 417 aaKnown RBP9.36□□□□□ -0.91
SSRP1-203ENST00000526696 RPL5P46777 297 aaKnown RBP9.36□□□□□ -0.91
SSRP1-203ENST00000526696 CLDN12P56749 244 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 SSX7Q7RTT5 188 aa9.36□□□□□ -0.91
SSRP1-203ENST00000526696 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
SSRP1-203ENST00000526696 TRAV1-2A0A0B4J238 106 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 METTL21EPA6NDL7 271 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 PDCD5O14737 125 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 HLA-DQB1P01920 261 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 CTXN2P0C2S0 81 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 CD36P16671 472 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
SSRP1-203ENST00000526696 ALDH3B2P48448 385 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 DAD1P61803 113 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 RPS25P62851 125 aaKnown RBP9.35□□□□□ -0.91
SSRP1-203ENST00000526696 TTC32Q5I0X7 151 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 MGLLQ99685 303 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 COMMD5Q9GZQ3 224 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 TAS2R8Q9NYW2 309 aa9.35□□□□□ -0.91
SSRP1-203ENST00000526696 TEX50A0A1B0GTY4 177 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 IFITM5A6NNB3 132 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 H3BMM0 161 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 CYB5BO43169 146 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 RGS10O43665 173 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 GNB3P16520 340 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 DTYMKP23919 212 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 TALDO1P37837 337 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 FABP5Q01469 135 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
SSRP1-203ENST00000526696 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 PRSS48Q7RTY5 328 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 SPARTQ8N0X7 666 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
SSRP1-203ENST00000526696 NDUFA13Q9P0J0 144 aa9.34□□□□□ -0.91
SSRP1-203ENST00000526696 PUS1Q9Y606 427 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSRP1-203ENST00000526696 I3L2K1 104 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 TRAPPC2P0DI81 140 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 TRAPPC2BP0DI82 140 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
SSRP1-203ENST00000526696 FXYD7P58549 80 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 LINC00315P59091 139 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
SSRP1-203ENST00000526696 HES5Q5TA89 166 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 GINS3Q9BRX5 216 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 DCSTAMPQ9H295 470 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 OR2W1Q9Y3N9 320 aa9.33□□□□□ -0.92
SSRP1-203ENST00000526696 A0A1B0GU03 582 aa9.32□□□□□ -0.92
SSRP1-203ENST00000526696 MFAP4P55083 255 aa9.32□□□□□ -0.92
SSRP1-203ENST00000526696 TBCEQ15813 527 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-203ENST00000526696 POU2AF1Q16633 256 aa9.32□□□□□ -0.92
SSRP1-203ENST00000526696 SLC25A46Q96AG3 418 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms