RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 PRSS3P35030 304 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 NPBWR1P48145 328 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 TMEM187Q14656 261 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 H2BFWTQ7Z2G1 175 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 HRH4Q9H3N8 390 aa12.54□□□□□ -0.4
TSKU-202ENST00000525167 DNAH10Q8IVF4 4471 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 HRH1P35367 487 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
TSKU-202ENST00000525167 ERHP84090 104 aaKnown RBP12.53□□□□□ -0.4
TSKU-202ENST00000525167 PHLDA2Q53GA4 152 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 TMEM41BQ5BJD5 291 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 GBGT1Q8N5D6 347 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 TMEM231Q9H6L2 316 aa12.53□□□□□ -0.4
TSKU-202ENST00000525167 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
TSKU-202ENST00000525167 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 UCP3P55916 312 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 TOMM20LQ6UXN7 152 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 ZNF600Q6ZNG1 722 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 TBC1D26Q86UD7 250 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 SAMD12Q8N8I0 201 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 DUSP18Q8NEJ0 188 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
TSKU-202ENST00000525167 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 IGKV1D-39P04432 117 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 TSPAN5P62079 268 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 NEDD8Q15843 81 aa12.51□□□□□ -0.41
TSKU-202ENST00000525167 PINX1Q96BK5 328 aaKnown RBP12.51□□□□□ -0.41
TSKU-202ENST00000525167 CORTO00230 105 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 IGHV3-48P01763 117 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 HLA-DMAP28067 261 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 DEFB131AP59861 70 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PRR20EP86478 221 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PRR20CP86479 221 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PRR20DP86480 221 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PRR20BP86481 221 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PRR20AP86496 221 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 KCTD21Q4G0X4 260 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 STHQ8IWL8 128 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 Q8NAQ8 132 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 MRGPRFQ96AM1 343 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 ZFAND3Q9H8U3 227 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 SCPEP1Q9HB40 452 aa12.5□□□□□ -0.41
TSKU-202ENST00000525167 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
TSKU-202ENST00000525167 A0A1W2PS18 150 aa12.49□□□□□ -0.41
TSKU-202ENST00000525167 SPP1P10451 314 aa12.49□□□□□ -0.41
TSKU-202ENST00000525167 SNCAP37840 140 aa12.49□□□□□ -0.41
TSKU-202ENST00000525167 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
TSKU-202ENST00000525167 PVRIGQ6DKI7 326 aa12.49□□□□□ -0.41
TSKU-202ENST00000525167 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
TSKU-202ENST00000525167 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
TSKU-202ENST00000525167 SCGB2A1O75556 95 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 ATP6V1G2O95670 118 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 TMEM50AO95807 157 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 APOHP02749 345 aaPredicted RBP12.48□□□□□ -0.41
TSKU-202ENST00000525167 MIFP14174 115 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 RCVRNP35243 200 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
TSKU-202ENST00000525167 LEMD1Q68G75 181 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 APLNQ9ULZ1 77 aa12.48□□□□□ -0.41
TSKU-202ENST00000525167 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 DNAH6Q9C0G6 4158 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 IGLL5B9A064 214 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 DEFB4AO15263 64 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 ATG12O94817 140 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 NPPCP23582 126 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 SUB1P53999 127 aaKnown RBP eCLIP12.47□□□□□ -0.41
TSKU-202ENST00000525167 RND3P61587 244 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
TSKU-202ENST00000525167 SLC35G3Q8N808 338 aa12.47□□□□□ -0.41
TSKU-202ENST00000525167 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
TSKU-202ENST00000525167 PCLOQ9Y6V0 5065 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 A0A1B0GU03 582 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 ZNF705EA8MWA4 302 aaPredicted RBP12.46□□□□□ -0.41
TSKU-202ENST00000525167 K7EQG2 157 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 APOA1P02647 267 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 TGFBR1P36897 503 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 CENPSQ8N2Z9 138 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 FAM24BQ8N5W8 94 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 METTL26Q96S19 204 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
TSKU-202ENST00000525167 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
TSKU-202ENST00000525167 IGHV3-66A0A0C4DH42 116 aa12.45□□□□□ -0.42
TSKU-202ENST00000525167 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
TSKU-202ENST00000525167 P0C879 139 aa12.45□□□□□ -0.42
TSKU-202ENST00000525167 CRYBB3P26998 211 aa12.45□□□□□ -0.42
TSKU-202ENST00000525167 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
TSKU-202ENST00000525167 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
TSKU-202ENST00000525167 TRAV10A0A0B4J240 114 aa12.44□□□□□ -0.42
TSKU-202ENST00000525167 A0A0B4J293 547 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms