RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 IGHV4-38-2P0DP08 117 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 HTR1DP28221 377 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 OPRK1P41145 380 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS11-201ENST00000524454 DLX1P56177 255 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 ERHP84090 104 aaKnown RBP5.67□□□□□ -1.5
VPS11-201ENST00000524454 UTF1Q5T230 341 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 OR8G2PQ6IF36 304 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 PNKDQ8N490 385 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 Q8N7P7 452 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 BPIFCQ8NFQ6 507 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 TMEM190Q8WZ59 177 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 RPEQ96AT9 228 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 LINC00052Q96N35 136 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 DUX5Q96PT3 197 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 P2RX4Q99571 388 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 NPCDR1Q9BY65 106 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 HRH4Q9H3N8 390 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 DPM3Q9P2X0 92 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 LSM4Q9Y4Z0 139 aaKnown RBP5.67□□□□□ -1.5
VPS11-201ENST00000524454 ARL2-SNX15V9GYD0 113 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 WNK2Q9Y3S1 2297 aa5.67□□□□□ -1.5
VPS11-201ENST00000524454 TRAV40A0A0B4J280 105 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 CTXND1A0A1B0GTU2 59 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 TEX50A0A1B0GTY4 177 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 MDFIC2A0A1B0GVS7 189 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 A0A1W2PPI3 338 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SRRM4A7MD48 611 aaKnown RBP5.66□□□□□ -1.5
VPS11-201ENST00000524454 NXPH3O95157 252 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SNAPINO95295 136 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 CRYGBP07316 175 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
VPS11-201ENST00000524454 LINC00205P59089 165 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 RPS16P62249 146 aaKnown RBP5.66□□□□□ -1.5
VPS11-201ENST00000524454 EBI3Q14213 229 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 GUK1Q16774 197 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 ACOT6Q3I5F7 207 aaPredicted RBP5.66□□□□□ -1.5
VPS11-201ENST00000524454 KHDC3LQ587J8 217 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 ZNF506Q5JVG8 444 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 TPTE2P1Q5T6R2 138 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 RUSC1-AS1Q66K80 236 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SPSB3Q6PJ21 355 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 TEPPQ6URK8 271 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 BRD3OSQ6XYD6 125 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SSX9Q7RTT3 188 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SIGLECL1Q8N7X8 197 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.66□□□□□ -1.5
VPS11-201ENST00000524454 OR1L6Q8NGR2 347 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 NANPQ8TBE9 248 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 TMEM158Q8WZ71 300 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SCRT1Q9BWW7 348 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 SLC35B3Q9H1N7 401 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 ESM1Q9NQ30 184 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 MANBALQ9NQG1 85 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 RPRMQ9NS64 109 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 ONECUT1Q9UBC0 465 aa5.66□□□□□ -1.5
VPS11-201ENST00000524454 TRAV3A0A0B4J244 114 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 CYB5BO43169 146 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 NDUFA3O95167 84 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PF4P02776 101 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 IFNA4P05014 189 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 SFTA3P0C7M3 94 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 FGF7P21781 194 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 GATA3P23771 443 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PAX6P26367 422 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PSMB3P49720 205 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 UBE2E1P51965 193 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 RUNX1Q01196 453 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PAX8Q06710 450 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PRSS8Q16651 343 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 ETFRF1Q6IPR1 90 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 RBMS3Q6XE24 437 aaKnown RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 TMEM144Q7Z5S9 345 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 PPP1R27Q86WC6 154 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 Q8N3U1 123 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 NPBQ8NG41 125 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 TMEM170AQ8WVE7 144 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 RCC1LQ96I51 464 aaKnown RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 NARS2Q96I59 477 aaKnown RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 SLC35E1Q96K37 410 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 ZNF48Q96MX3 618 aaPredicted RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 RSG1Q9BU20 258 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 ACTR3CQ9C0K3 210 aaPredicted RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 SIRPDQ9H106 197 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 ZNF430Q9H8G1 570 aaPredicted RBP5.65□□□□□ -1.5
VPS11-201ENST00000524454 TREM1Q9NP99 234 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 SIGLEC9Q9Y336 463 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 U3KQE9 123 aa5.65□□□□□ -1.5
VPS11-201ENST00000524454 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.51
VPS11-201ENST00000524454 A0A1W2PRD5 423 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 A0A1W2PRF3 423 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 A0A1W2PRM7 423 aa5.64□□□□□ -1.51
VPS11-201ENST00000524454 SMCO3A2RU48 225 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms