RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 DMBX1Q8NFW5 382 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 Q9H8V8 135 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 A0A075B6Q4 140 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 HELTA6NFD8 242 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 H3BMM0 161 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 NPPCP23582 126 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 CLDN12P56749 244 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 OGFRL1Q5TC84 451 aaPredicted RBP12.2□□□□□ -0.46
PVT1-220ENST00000524165 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 Q9H3A6 140 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 PLEKHA2Q9HB19 425 aa12.2□□□□□ -0.46
PVT1-220ENST00000524165 YTHDF2Q9Y5A9 579 aaKnown RBP12.2□□□□□ -0.46
PVT1-220ENST00000524165 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 TMEM272A0A1B0GTI8 110 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 MYL12BO14950 172 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 TNFSF12O43508 249 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 P2RY1P47900 373 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 TMEM56Q96MV1 263 aa12.19□□□□□ -0.46
PVT1-220ENST00000524165 AK6Q9Y3D8 172 aaKnown RBP12.19□□□□□ -0.46
PVT1-220ENST00000524165 A0A1W2PPQ1 181 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 RPS10-NUDT3A0A1W2PQS6 291 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 NUDT3O95989 172 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 MT-CO2P00403 227 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 DHRS2Q13268 280 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 ICAM4Q14773 271 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 ZBTB34Q8NCN2 500 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 PYDC1Q8WXC3 89 aa12.18□□□□□ -0.46
PVT1-220ENST00000524165 SULT1C2O00338 296 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 CRYBB3P26998 211 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
PVT1-220ENST00000524165 EIF2B2P49770 351 aaKnown RBP12.17□□□□□ -0.46
PVT1-220ENST00000524165 DLK1P80370 383 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 CATR1Q13166 79 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 USF2Q15853 346 aaPredicted RBP12.17□□□□□ -0.46
PVT1-220ENST00000524165 SSX7Q7RTT5 188 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 MOB3AQ96BX8 217 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 CCL28Q9NRJ3 127 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 COMMD9Q9P000 198 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
PVT1-220ENST00000524165 A0A1B0GU03 582 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 HLA-DRB4P13762 266 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 SNRPD3P62318 126 aaKnown RBP12.16□□□□□ -0.46
PVT1-220ENST00000524165 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 ZNF555Q8NEP9 628 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 METTL26Q96S19 204 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
PVT1-220ENST00000524165 HLA-DRB4X5D2U9 266 aa12.16□□□□□ -0.46
PVT1-220ENST00000524165 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 HBE1P02100 147 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 NPBWR1P48145 328 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 ERVK-16P61578 105 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 CADM3Q8N126 398 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 NARS2Q96I59 477 aaKnown RBP12.15□□□□□ -0.46
PVT1-220ENST00000524165 PLA2G2DQ9UNK4 145 aa12.15□□□□□ -0.46
PVT1-220ENST00000524165 EREGO14944 169 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 IFNA5P01569 189 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
PVT1-220ENST00000524165 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
PVT1-220ENST00000524165 CLINT1Q14677 625 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 ZNF114Q8NC26 417 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 SECTM1Q8WVN6 248 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 FKBP11Q9NYL4 201 aa12.14□□□□□ -0.47
PVT1-220ENST00000524165 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
PVT1-220ENST00000524165 PINX1Q96BK5 328 aaKnown RBP12.13□□□□□ -0.47
PVT1-220ENST00000524165 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
PVT1-220ENST00000524165 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
PVT1-220ENST00000524165 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
PVT1-220ENST00000524165 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 FAM90A26D6RGX4 464 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 SNAPC5O75971 98 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 TMEM50AO95807 157 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 RAB6AP20340 208 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 Q6ZRN7 208 aaPredicted RBP12.12□□□□□ -0.47
PVT1-220ENST00000524165 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 V9GY05 133 aa12.12□□□□□ -0.47
PVT1-220ENST00000524165 F5H768 121 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 ARL6IP5O75915 188 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 FXYD7P58549 80 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 ARPC4P59998 168 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 HES5Q5TA89 166 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 TPRA1Q86W33 373 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
PVT1-220ENST00000524165 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
PVT1-220ENST00000524165 PPP5CP53041 499 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 ERVFC1-1P60608 527 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 HACD4Q5VWC8 232 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 TMEM91Q6ZNR0 172 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms