RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CTLA4P16410 223 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CRISP2P16562 243 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF708P17019 499 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF25P17030 456 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF43P17038 809 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BOP23527 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 NFYBP25208 207 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 PSMB6P28072 239 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 OTX1P32242 354 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BBP33778 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CTRLP40313 264 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CX3CR1P49238 355 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SULT1A1P50225 295 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SULT1A2P50226 295 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 RND2P52198 227 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CEBPGP53567 150 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CLDN18P56856 261 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BDP58876 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 UBE2MP61081 183 aaKnown RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BCP62807 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 RANP62826 216 aaKnown RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 FMODQ06828 376 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 USF2Q15853 346 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST2H2BEQ16778 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 KHDC3LQ587J8 217 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 C1orf194Q5T5A4 169 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CARD17Q5XLA6 110 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 DNM1P34Q6PK57 102 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 DEGS2Q6QHC5 323 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF322Q6U7Q0 402 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 IGFL3Q6UXB1 125 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SLC25A26Q70HW3 274 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 BHLHA15Q7RTS1 189 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 TMEM183AQ8IXX5 376 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 TMEM61Q8N0U2 210 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF664Q8N3J9 261 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ACBD4Q8NC06 268 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CCDC54Q8NEL0 328 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 NOXO1Q8NFA2 376 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 OR10D4PQ8NGN7 298 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 KCNG3Q8TAE7 436 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 FNDC9Q8TBE3 224 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ABHD3Q8WU67 409 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ORAOV1Q8WV07 137 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ASB17Q8WXJ9 295 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 RDH5Q92781 318 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BHQ93079 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 MUCL1Q96DR8 90 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 AQP10Q96PS8 301 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BNQ99877 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 HIST1H2BMQ99879 126 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 C20orf144Q9BQM9 153 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ADAT1Q9BUB4 502 aaKnown RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 EMC6Q9BV81 110 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SCRT1Q9BWW7 348 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 ZNF471Q9BX82 626 aaPredicted RBP2.91□□□□□ -1.94
SKP1-210ENST00000522855 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 NMES1Q9C002 83 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 TREM1Q9NP99 234 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CCL28Q9NRJ3 127 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SLC2A9Q9NRM0 540 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CYTL1Q9NRR1 136 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 CALYQ9NYX4 217 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 OR5AC2Q9NZP5 309 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 COMMD9Q9P000 198 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 MTFP1Q9UDX5 166 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 SHPKQ9UHJ6 478 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 VAX2Q9UIW0 290 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 POLR1DQ9Y2S0 133 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 TACC2O95359 2948 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 POLQO75417 2590 aa2.91□□□□□ -1.94
SKP1-210ENST00000522855 TET2Q6N021 2002 aaPredicted RBP2.9□□□□□ -1.94
SKP1-210ENST00000522855 CCDC168Q8NDH2 2452 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 TRBV24-1A0A075B6N3 115 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 A0A0A6YYH2 397 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 IGLV1-36A0A0B4J1U3 117 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 TRAV39A0A0B4J263 110 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 DAPL1A0PJW8 107 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 A6NJ64 397 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 SLC22A20A6NK97 555 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 ZNF716A6NP11 495 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 K7EM74 188 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 GOSR2O14653 212 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 SLC16A7O60669 478 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 UPK3AO75631 287 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 VAMP5O95183 116 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 IFNA21P01568 189 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 CTXN2P0C2S0 81 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 NBEAP1P0C6P0 100 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 PGA4P0DJD7 388 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 PGA3P0DJD8 388 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 GZMBP10144 247 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 SCGB1A1P11684 91 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 ATF1P18846 271 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 CELP19835 753 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 CSNK1A1P48729 337 aa2.9□□□□□ -1.95
SKP1-210ENST00000522855 ZNF133P52736 654 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms