RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 TMEM69Q5SWH9 247 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 ZNF773Q6PK81 442 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 LRRTM1Q86UE6 522 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 NKAIN3Q8N8D7 197 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 STXBP6Q8NFX7 210 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 UHRF2Q96PU4 802 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 MYCBPQ99417 103 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 C1QTNF4Q9BXJ3 329 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 CLEC2DQ9UHP7 191 aa6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 RBM7Q9Y580 266 aaKnown RBP6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 F11RQ9Y624 299 aaKnown RBP6.07□□□□□ -1.44
TRAPPC9-212ENST00000521944 A0A087WTM6 91 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 A0A1B0GU03 582 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 I3L2K1 104 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 UPK2O00526 184 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 IGHV3-48P01763 117 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 CDK1P06493 297 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 FCGR3AP08637 254 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 FXYD7P58549 80 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 DEFB1P60022 68 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 INSL4Q14641 139 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 HSP90B2PQ58FF3 399 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 PSMG4Q5JS54 123 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 ZNF709Q8N972 641 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 OR4S2Q8NH73 311 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 RHOXF1Q8NHV9 184 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 UPK3BQ9BT76 320 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 QTRT1Q9BXR0 403 aaKnown RBP6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 FAM107BQ9H098 131 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 FGF20Q9NP95 211 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 MRPS7Q9Y2R9 242 aaKnown RBP6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 PRELID3BQ9Y3B1 194 aa6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 PUS1Q9Y606 427 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRAPPC9-212ENST00000521944 TEX50A0A1B0GTY4 177 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 GAGE12HA6NDE8 117 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 HLA-DQB1P01920 261 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 GNB3P16520 340 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 ALDH3B2P48448 385 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 FHL2Q14192 279 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 FLOT2Q14254 428 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 ESRGQ1W209 222 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 GDF5OSQ5U4N7 250 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 PQLC1Q8N2U9 271 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 APH1BQ8WW43 257 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 HRASLSQ9HDD0 168 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 NDUFA4L2Q9NRX3 87 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 TMEM140Q9NV12 185 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 SPATA2Q9UM82 520 aa6.05□□□□□ -1.44
TRAPPC9-212ENST00000521944 LOC102723971A0A1B0GUV8 181 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 SNTNA6NMZ2 147 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 F5H768 121 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 HRASP01112 189 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 DCKP27707 260 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 GNRHRP30968 328 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 ASIPP42127 132 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 NUTF2P61970 127 aaKnown RBP6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 FCN2Q15485 313 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 POU2AF1Q16633 256 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 SMN1Q16637 294 aaKnown RBP6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 TCTEX1D2Q8WW35 142 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 SLC25A46Q96AG3 418 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 GFI1Q99684 422 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 GINS4Q9BRT9 223 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 TAS2R8Q9NYW2 309 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 POMPQ9Y244 141 aa6.04□□□□□ -1.44
TRAPPC9-212ENST00000521944 PNMA8CA0A1B0GUJ8 204 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 TRAPPC2P0DI81 140 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 TRAPPC2BP0DI82 140 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 HLA-DRB4P13762 266 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 NFYAP23511 347 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 P2RY1P47900 373 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 ERVFC1-1P60608 527 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 ZIK1Q3SY52 487 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 OGFRL1Q5TC84 451 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 HSD17B10Q99714 261 aaKnown RBP6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 GINS3Q9BRX5 216 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 COMMD5Q9GZQ3 224 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 DCSTAMPQ9H295 470 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 FNDC4Q9H6D8 234 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 OR2W1Q9Y3N9 320 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 HLA-DRB4X5D2U9 266 aa6.03□□□□□ -1.44
TRAPPC9-212ENST00000521944 PLAC8L1A1L4L8 177 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 HELTA6NFD8 242 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 IGKV3-20P01619 116 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 SLPIP03973 132 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 ALPLP05186 524 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 EIF4EP06730 217 aaKnown RBP6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 CRYBB3P26998 211 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 PPP5CP53041 499 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 MFAP4P55083 255 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 NHLH2Q02577 135 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 CLINT1Q14677 625 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 P2RY14Q15391 338 aa6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 RBM48Q5RL73 367 aaKnown RBP6.02□□□□□ -1.45
TRAPPC9-212ENST00000521944 TMPRSS11AQ6ZMR5 421 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms