RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 LEAP2Q969E1 77 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 FAM218AQ96MZ4 157 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 YPEL2Q96QA6 119 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 RBKSQ9H477 322 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PSENENQ9NZ42 101 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 GNG12Q9UBI6 72 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CLN8Q9UBY8 286 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CACFD1Q9UGQ2 172 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 WSB1Q9Y6I7 421 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PIEZO1Q92508 2521 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 KIAA2026Q5HYC2 2103 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 SMG1Q96Q15 3661 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 A0A087WW49 117 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 A0A1W2PPE3 182 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 LRRC30A6NM36 301 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ITGB1BP1O14713 200 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 RBFOX2O43251 390 aaKnown RBP eCLIP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 NDUFA7O95182 113 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 KRASP01116 189 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ARG1P05089 322 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SFTA3P0C7M3 94 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SAA2P0DJI9 122 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 GZMHP20718 246 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SNCAP37840 140 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 RAB5CP51148 216 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 OR2B8PP59922 312 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 UBE2KP61086 200 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 DEFA5Q01523 94 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SLC38A11Q08AI6 406 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF616Q08AN1 781 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 KLRB1Q12918 225 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 BTN1A1Q13410 526 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SPINK9Q5DT21 86 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 CT45A1Q5HYN5 189 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SSX8Q7RTT4 187 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 SSX7Q7RTT5 188 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 STX12Q86Y82 276 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 LINC00518Q8N0U6 118 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ST6GALNAC3Q8NDV1 305 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 OR2G3Q8NGZ4 309 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 CT45A3Q8NHU0 189 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 FAM213BQ8TBF2 198 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 RBMXL1Q96E39 390 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 UHRF2Q96PU4 802 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 HSD17B10Q99714 261 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF251Q9BRH9 671 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 PARD6GQ9BYG4 376 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 NKX6-2Q9C056 277 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 HEATR1Q9H583 2144 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 TREM1Q9NP99 234 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 UQCC1Q9NVA1 299 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 IDI2-AS1Q9NZ38 188 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNRD1Q9P1U0 126 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 CTSZQ9UBR2 303 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 RAI1Q7Z5J4 1906 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 CACNA1AO00555 2505 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 NBASA2RRP1 2371 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 ICE1Q9Y2F5 2266 aa3.81□□□□□ -1.8
CTNNA1-212ENST00000518919 DSCAMO60469 2012 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 TRGV10A0A0A0MS01 117 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 TRAV3A0A0B4J244 114 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 UBE2L5PA0A1B0GUS4 154 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 A0A1B0GV50 99 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 A0A1B0GW64 132 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF729A6NN14 1252 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 UMAD1C9J7I0 102 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 F8W036 122 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 RNASEK-C17orf49H0YIS7 233 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 BMPR1BO00238 502 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 NUPL2O15504 423 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 ZG16O60844 167 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 PRH1P02810 166 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 OR8U8P0C7N1 319 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 KIR2DS2P43631 304 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 GNG10P50151 68 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 RAB7AP51149 207 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 DLX6P56179 175 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL20P78556 96 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF726P1Q15940 193 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 GUK1Q16774 197 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 LRRC75BQ2VPJ9 315 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 SPANXN5Q5MJ07 72 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 LYPD2Q6UXB3 125 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 CBLN2Q8IUK8 224 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 LINC01560Q8TB33 94 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 DTD1Q8TEA8 209 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 GNPNAT1Q96EK6 184 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 RSG1Q9BU20 258 aa3.8□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM147Q9BVK8 224 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms