RNA–Protein interactions for RNA: ENST00000513325.5

HERC3-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-211ENST00000513325 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.41
HERC3-211ENST00000513325 NCS1P62166 190 aa12.46□□□□□ -0.41
HERC3-211ENST00000513325 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
HERC3-211ENST00000513325 CSTL1Q9H114 145 aa12.46□□□□□ -0.41
HERC3-211ENST00000513325 KLK5Q9Y337 293 aaPredicted RBP12.46□□□□□ -0.41
HERC3-211ENST00000513325 RCVRNP35243 200 aa12.45□□□□□ -0.42
HERC3-211ENST00000513325 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
HERC3-211ENST00000513325 IZUMO4Q1ZYL8 232 aa12.45□□□□□ -0.42
HERC3-211ENST00000513325 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
HERC3-211ENST00000513325 FAM90A2PQ658T7 463 aa12.45□□□□□ -0.42
HERC3-211ENST00000513325 CMTM3Q96MX0 182 aa12.45□□□□□ -0.42
HERC3-211ENST00000513325 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
HERC3-211ENST00000513325 M0QYG6 137 aa12.44□□□□□ -0.42
HERC3-211ENST00000513325 ELK1P19419 428 aa12.44□□□□□ -0.42
HERC3-211ENST00000513325 TOMM20LQ6UXN7 152 aa12.44□□□□□ -0.42
HERC3-211ENST00000513325 TCF24Q7RTU0 167 aa12.44□□□□□ -0.42
HERC3-211ENST00000513325 HPGDSO60760 199 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
HERC3-211ENST00000513325 PI3P19957 117 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 VBP1P61758 197 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 GATAD1Q8WUU5 269 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
HERC3-211ENST00000513325 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 RARRES2Q99969 163 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 GINS3Q9BRX5 216 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 FUNDC2Q9BWH2 189 aa12.43□□□□□ -0.42
HERC3-211ENST00000513325 IGHV3-66A0A0C4DH42 116 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 TNFAIP8O95379 198 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 PGAM2P15259 253 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 NPBWR1P48145 328 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 PAFAH1B2P68402 229 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 RNASE12Q5GAN4 147 aaKnown RBP12.42□□□□□ -0.42
HERC3-211ENST00000513325 LILRB2Q8N423 598 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 DUSP18Q8NEJ0 188 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
HERC3-211ENST00000513325 A0A0B4J293 547 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 SNCAP37840 140 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 PIGPP57054 158 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 RND3P61587 244 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 SLC35G3Q8N808 338 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 OR11H2Q8NH07 326 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 ZFAND3Q9H8U3 227 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 KLK11Q9UBX7 282 aa12.41□□□□□ -0.42
HERC3-211ENST00000513325 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
HERC3-211ENST00000513325 DNASE2O00115 360 aaPredicted RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 DFFBO76075 338 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 TMEM50AO95807 157 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 IFNA17P01571 189 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 CD5P06127 495 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 P0C879 139 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 ETV6P41212 452 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 AKR1C2P52895 323 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
HERC3-211ENST00000513325 MS4A6AQ9H2W1 248 aa12.4□□□□□ -0.42
HERC3-211ENST00000513325 A0A1B0GU03 582 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 FAM25AB3EWG3 89 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 FAM25CB3EWG5 89 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 FAM25GB3EWG6 89 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 INS-IGF2F8WCM5 200 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 CA1P00915 261 aaPredicted RBP12.39□□□□□ -0.43
HERC3-211ENST00000513325 RORCP51449 518 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 DEFB131AP59861 70 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 LEMD1Q68G75 181 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 FAM24BQ8N5W8 94 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
HERC3-211ENST00000513325 C3orf85A0A1B0GTC6 90 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 DEDDO75618 318 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 CD3DP04234 171 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
HERC3-211ENST00000513325 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
HERC3-211ENST00000513325 SP6Q3SY56 376 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 PDCD10Q9BUL8 212 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
HERC3-211ENST00000513325 MRPL36Q9P0J6 103 aaKnown RBP12.38□□□□□ -0.43
HERC3-211ENST00000513325 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
HERC3-211ENST00000513325 DEFB4AO15263 64 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 ATG12O94817 140 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 HOXA1P49639 335 aaPredicted RBP12.37□□□□□ -0.43
HERC3-211ENST00000513325 PPP5CP53041 499 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 MLANAQ16655 118 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 MZT2AQ6P582 158 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 FNDC4Q9H6D8 234 aaPredicted RBP12.37□□□□□ -0.43
HERC3-211ENST00000513325 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
HERC3-211ENST00000513325 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms