RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ZNF106Q9H2Y7 1883 aaKnown RBP3.59□□□□□ -1.83
RFC1-214ENST00000512726 TRBV19A0A075B6N1 114 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 IGHV1-18A0A0C4DH31 117 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 G3V2T6 193 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 BUB1B-PAK6H3BSN5 160 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 CIAO1O76071 339 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 CDC42P60953 191 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 TMEM258P61165 79 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 SS18Q15532 418 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 BPIFA4PQ86YQ2 179 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 ERGIC3Q9Y282 383 aa3.59□□□□□ -1.83
RFC1-214ENST00000512726 MIA2Q96PC5 1412 aa3.59□□□□□ -1.84
RFC1-214ENST00000512726 KDM5BQ9UGL1 1544 aa3.59□□□□□ -1.84
RFC1-214ENST00000512726 TRAV4A0A0B4J268 109 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 CLDN25C9JDP6 229 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 TRAPPC2LH3BP13 241 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 DEFA4P12838 97 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
RFC1-214ENST00000512726 ZNF80P51504 273 aaPredicted RBP3.58□□□□□ -1.84
RFC1-214ENST00000512726 TCTAP57738 103 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 RHOBP62745 196 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 KISS1Q15726 138 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 AKR1C8PQ5T2L2 129 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 C3orf33Q6P1S2 294 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 MIR17HGQ75NE6 70 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 Q8NDZ9 215 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 TERB2Q8NHR7 220 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 RNF122Q9H9V4 155 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 PRNDQ9UKY0 176 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 DENND4BO75064 1496 aaPredicted RBP3.58□□□□□ -1.84
RFC1-214ENST00000512726 CCDC88AQ3V6T2 1871 aa3.58□□□□□ -1.84
RFC1-214ENST00000512726 NDUFC2O95298 119 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 IFNA7P01567 189 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 SPI1P17947 270 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 CSRP1P21291 193 aaKnown RBP3.57□□□□□ -1.84
RFC1-214ENST00000512726 PTPRBP23467 1997 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 CRYBA4P53673 196 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 NCALDP61601 193 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 TRAPPC6BQ86SZ2 158 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 CLVS1Q8IUQ0 354 aaPredicted RBP3.57□□□□□ -1.84
RFC1-214ENST00000512726 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 C11orf40Q8WZ69 217 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 ZHX1-C8orf76Q96EF9 292 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 GINS4Q9BRT9 223 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 DOHHQ9BU89 302 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 BIN3Q9NQY0 253 aa3.57□□□□□ -1.84
RFC1-214ENST00000512726 MPDZO75970 2070 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 TOPBP1Q92547 1522 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 FMN1Q68DA7 1419 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 TMSB15BA0A087X1C1 80 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 TRGV4A0A0C4DH28 118 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 IFI30P13284 250 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 PHBP35232 272 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 ATP5G3P48201 142 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 FXYD2P54710 66 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 PIGPP57054 158 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 YPEL3P61236 119 aaPredicted RBP3.56□□□□□ -1.84
RFC1-214ENST00000512726 SUPT4H1P63272 117 aaKnown RBP3.56□□□□□ -1.84
RFC1-214ENST00000512726 SNCBQ16143 134 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 FAM27BQ5VT28 67 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 LCA10Q71F78 164 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 TMEM106AQ96A25 262 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 PCBD2Q9H0N5 130 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 CENPHQ9H3R5 247 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 LYRM2Q9NU23 88 aaPredicted RBP3.56□□□□□ -1.84
RFC1-214ENST00000512726 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 UFC1Q9Y3C8 167 aa3.56□□□□□ -1.84
RFC1-214ENST00000512726 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 AIPO00170 330 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 GNG5P63218 68 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 RHEBQ15382 184 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 TSNQ15631 228 aaKnown RBP3.55□□□□□ -1.84
RFC1-214ENST00000512726 ZNF181Q2M3W8 571 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.55□□□□□ -1.84
RFC1-214ENST00000512726 SH3BGRL3Q9H299 93 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 ECM29Q5VYK3 1845 aa3.55□□□□□ -1.84
RFC1-214ENST00000512726 ARRDC5A6NEK1 342 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 LY6LH3BQJ8 138 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 H7C1C5 153 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 J3QQQ9 107 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 SERPINB1P30740 379 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 RPL26P61254 145 aaKnown RBP3.54□□□□□ -1.84
RFC1-214ENST00000512726 LCN6P62502 163 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 NDUFA5Q16718 116 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 ZNF791Q3KP31 576 aaPredicted RBP3.54□□□□□ -1.84
RFC1-214ENST00000512726 Q6ZTI0 123 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 TMEM86AQ8N2M4 240 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 PFN4Q8NHR9 129 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 MED29Q9NX70 200 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 SSR3Q9UNL2 185 aa3.54□□□□□ -1.84
RFC1-214ENST00000512726 RPL26L1Q9UNX3 145 aaKnown RBP3.54□□□□□ -1.84
RFC1-214ENST00000512726 CPAMD8Q8IZJ3 1885 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms