RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 PINX1Q96BK5 328 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 MISP3Q96FF7 219 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 C2orf50Q96LR7 162 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 GON7Q9BXV9 100 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 MED28Q9H204 178 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 ENY2Q9NPA8 101 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 ZC4H2Q9NQZ6 224 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 PAIP2BQ9ULR5 123 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 IGLV11-55A0A075B6I3 123 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 NUDT19A8MXV4 375 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 CCNKO75909 580 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 ELANEP08246 267 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 SLC25A6P12236 298 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 SNCAP37840 140 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 NKX2-1P43699 371 aaPredicted RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 S100A10P60903 97 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 RPL23AP62750 156 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 ERHP84090 104 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 RAB32Q13637 225 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 OR5M8Q8NGP6 311 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 OR52E5Q8NH55 327 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 MRPL36Q9P0J6 103 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 ZNF580Q9UK33 172 aa6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 RCL1Q9Y2P8 373 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 F11RQ9Y624 299 aaKnown RBP6.84□□□□□ -1.31
SCAMP1-202ENST00000506858 TRBV9A0A0B4J1U6 114 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 K7EPK0 472 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 SYNGR2O43760 224 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 TSPAN15O95858 294 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 IFNA10P01566 189 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 PAX9P55771 341 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 IL15RAQ13261 267 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 C15orf32Q32M92 178 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 Q5BKY6 102 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 SPANXN5Q5MJ07 72 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 RNF152Q8N8N0 203 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 MYOZ3Q8TDC0 251 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 CHAC2Q8WUX2 184 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 TMEM68Q96MH6 324 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 OR4C12Q96R67 309 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 IGHV3-35A0A0C4DH35 117 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 PPP5D1E7EU14 171 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 H0YIZ8 118 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 K7EIM0 57 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 GHRHP01286 108 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 ATP5G2Q06055 141 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 KRTAP21-3Q3LHN1 58 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 PDLIM3Q53GG5 364 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 Q6ZNX1 250 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 SLC24A4Q8NFF2 622 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 RAX2Q96IS3 184 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 SRSF8Q9BRL6 282 aaKnown RBP6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 FNDC4Q9H6D8 234 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 OR5AC2Q9NZP5 309 aa6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 TSSC4Q9Y5U2 329 aaPredicted RBP6.83□□□□□ -1.32
SCAMP1-202ENST00000506858 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 A0A087WW49 117 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 FAM24AA6NFZ4 105 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 SMLR1H3BR10 107 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 I3L2K1 104 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 MT-CO2P00403 227 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 NPY1RP25929 384 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 CDX1P47902 265 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 RRAS2P62070 204 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 EXOSC2Q13868 293 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 BSXQ3C1V8 233 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 CLEC19AQ6UXS0 136 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 COMMD1Q8N668 190 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 UBAC2Q8NBM4 344 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 NECAP1Q8NC96 275 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 OR1P1Q8NH06 330 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 SCARB1Q8WTV0 552 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 PSENENQ9NZ42 101 aa6.82□□□□□ -1.32
SCAMP1-202ENST00000506858 PIGBOS1A0A0B4J2F0 54 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 FAM90A26D6RGX4 464 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 I3L521 148 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 MED6O75586 246 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 IFNA4P05014 189 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 METTL15P1P0C7V9 234 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 HTR2BP41595 481 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 SLURP1P55000 103 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 ARL16Q0P5N6 197 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 HSD17B13Q7Z5P4 300 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 NDUFA11Q86Y39 141 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 OR11H1Q8NG94 326 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 PPP1R1CQ8WVI7 109 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 BSCL2Q96G97 398 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 RNF126Q9BV68 326 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 C11orf1Q9H5F2 150 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 SLA2Q9H6Q3 261 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 ZFP57Q9NU63 452 aa6.81□□□□□ -1.32
SCAMP1-202ENST00000506858 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms