RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ONECUT1Q9UBC0 465 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GNG12Q9UBI6 72 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 KAAG1Q9UBP8 84 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 JPT1Q9UK76 154 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FLVCR2Q9UPI3 526 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PRELID3BQ9Y3B1 194 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 HSPB11Q9Y547 144 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM56-RWDD3S4R434 201 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZZEF1O43149 2961 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 MYO9AB2RTY4 2548 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 MYO15AQ9UKN7 3530 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 VPS13AQ96RL7 3174 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ITPR1Q14643 2758 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HECTD1Q9ULT8 2610 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 WDFY3Q8IZQ1 3526 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PTPRBP23467 1997 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ABCA12Q86UK0 2595 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 DSPP15924 2871 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MAP1BP46821 2468 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SEC16AO15027 2179 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV1OR15-1A0A075B7D0 117 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1D-8A0A087WSZ0 117 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 BORCS7-ASMTA0A0B4J1R7 106 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 KBTBD11-OT1A0A1B0GTJ5 212 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 NKX2-6A6NCS4 301 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PCNX2A6NKB5 2137 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF705EA8MWA4 302 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 C12orf77C9JDV5 145 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 BOLA2-SMG1P6H3BVE0 249 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 K7EPK0 472 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 WRBO00258 174 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TOR1AO14656 332 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HSD17B6O14756 317 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HMGB3O15347 200 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ARPC5O15511 151 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RBFOX2O43251 390 aaKnown RBP eCLIP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF861PO60384 105 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF737O75373 536 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MED6O75586 246 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PGLYRP1O75594 196 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RP2O75695 350 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MPC2O95563 127 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HRASP01112 189 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 HBZP02008 142 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RBP4P02753 201 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 OR5AC1P0C628 307 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 OR8U9P0C7N5 309 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 IGLL1P15814 213 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 IL3RAP26951 378 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 S100A11P31949 105 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 KIR2DS2P43631 304 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 P2RY1P47900 373 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 EFNA4P52798 201 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PRRX1P54821 245 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ATP5IP56385 69 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 H2BFSP57053 126 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TAS2R30P59541 319 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RPL23AP62750 156 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 GNB2P62879 340 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RPL31P62899 125 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SUPT4H1P63272 117 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TFF3Q07654 80 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 BAMBIQ13145 260 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 EDDM3AQ14507 147 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF345Q14585 488 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC9A3R2Q15599 337 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 IAH1Q2TAA2 248 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ALKBH6Q3KRA9 238 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM155Q4W5P6 130 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MORN2Q502X0 79 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PRAMEF6Q5VXH4 476 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM71F2Q6NXP2 309 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PRSS54Q6PEW0 395 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 H2BFWTQ7Z2G1 175 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC51BQ86UW2 128 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 TGIF2LYQ8IUE0 185 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM71E2Q8N5Q1 922 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 C14orf178Q8N769 122 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 C8orf31Q8N9H6 132 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 DEFB108BQ8NET1 73 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 OR8U1Q8NH10 309 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 OR51H1Q8NH63 302 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RNASE11Q8TAA1 199 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 LINC01560Q8TB33 94 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PLPPR1Q8TBJ4 325 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 GLYATL2Q8WU03 294 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PPP1R1CQ8WVI7 109 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 CAPSLQ8WWF8 208 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ITLN2Q8WWU7 325 aaPredicted RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MAFIPQ8WZ33 124 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 DCUN1D4Q92564 292 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 RBPMSQ93062 196 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 LSM10Q969L4 123 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 MRGPRFQ96AM1 343 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 PINX1Q96BK5 328 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 SEC22AQ96IW7 307 aa1.74□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF714Q96N38 554 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms