RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 VBP1P61758 197 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 TMEM217Q8N7C4 229 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 FUNDC2Q9BWH2 189 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 M0QYG6 137 aa18.23■□□□□ 0.51
HERC4-212ENST00000505760 HPGDSO60760 199 aa18.23■□□□□ 0.51
HERC4-212ENST00000505760 CEMP1Q6PRD7 247 aaPredicted RBP18.23■□□□□ 0.51
HERC4-212ENST00000505760 ZNF414Q96IQ9 312 aa18.23■□□□□ 0.51
HERC4-212ENST00000505760 IGHV3OR16-13A0A075B7E8 117 aa18.22■□□□□ 0.51
HERC4-212ENST00000505760 IGHV3-74A0A0B4J1X5 117 aa18.22■□□□□ 0.51
HERC4-212ENST00000505760 PGAM2P15259 253 aa18.22■□□□□ 0.51
HERC4-212ENST00000505760 ATF4P18848 351 aaPredicted RBP18.22■□□□□ 0.51
HERC4-212ENST00000505760 GINS3Q9BRX5 216 aa18.22■□□□□ 0.51
HERC4-212ENST00000505760 SNCAP37840 140 aa18.21■□□□□ 0.51
HERC4-212ENST00000505760 ZNF124Q15973 351 aa18.21■□□□□ 0.51
HERC4-212ENST00000505760 SPINK9Q5DT21 86 aa18.21■□□□□ 0.51
HERC4-212ENST00000505760 GBGT1Q8N5D6 347 aa18.21■□□□□ 0.51
HERC4-212ENST00000505760 KLK5Q9Y337 293 aaPredicted RBP18.21■□□□□ 0.51
HERC4-212ENST00000505760 FAM25AB3EWG3 89 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 FAM25CB3EWG5 89 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 FAM25GB3EWG6 89 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 NPBWR1P48145 328 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 RORCP51449 518 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 PAFAH1B2P68402 229 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 IZUMO4Q1ZYL8 232 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 RNASE12Q5GAN4 147 aaKnown RBP18.2■□□□□ 0.5
HERC4-212ENST00000505760 ZNF486Q96H40 463 aaPredicted RBP18.2■□□□□ 0.5
HERC4-212ENST00000505760 CSTL1Q9H114 145 aa18.2■□□□□ 0.5
HERC4-212ENST00000505760 MPTX1A8MV57 137 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 PI3P19957 117 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 AKR1C2P52895 323 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 PIGPP57054 158 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 RND3P61587 244 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 RNASE10Q5GAN6 216 aaKnown RBP18.19■□□□□ 0.5
HERC4-212ENST00000505760 MZT2AQ6P582 158 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 SLC35G3Q8N808 338 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 DUSP18Q8NEJ0 188 aa18.19■□□□□ 0.5
HERC4-212ENST00000505760 CD5P06127 495 aa18.18■□□□□ 0.5
HERC4-212ENST00000505760 FAM90A2PQ658T7 463 aa18.18■□□□□ 0.5
HERC4-212ENST00000505760 TOMM20LQ6UXN7 152 aa18.18■□□□□ 0.5
HERC4-212ENST00000505760 TCF24Q7RTU0 167 aa18.18■□□□□ 0.5
HERC4-212ENST00000505760 KLK11Q9UBX7 282 aa18.18■□□□□ 0.5
HERC4-212ENST00000505760 ATG12O94817 140 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 IFNA17P01571 189 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 IGKV1-5P01602 117 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 GATAD1Q8WUU5 269 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 TP53RKQ96S44 253 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 PDCD10Q9BUL8 212 aa18.17■□□□□ 0.5
HERC4-212ENST00000505760 ST8SIA3O43173 380 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 ZNF600Q6ZNG1 722 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 ARRDC1Q8N5I2 433 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 ST8SIA2Q92186 375 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 AP3S1Q92572 193 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 RARRES2Q99969 163 aa18.16■□□□□ 0.5
HERC4-212ENST00000505760 PUS1Q9Y606 427 aaKnown RBP eCLIP18.16■□□□□ 0.5
HERC4-212ENST00000505760 KMT2AQ03164 3969 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 A0A0B4J293 547 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 DNASE2O00115 360 aaPredicted RBP18.15■□□□□ 0.5
HERC4-212ENST00000505760 CD3DP04234 171 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 SUB1P53999 127 aaKnown RBP eCLIP18.15■□□□□ 0.5
HERC4-212ENST00000505760 RPL11P62913 178 aaKnown RBP18.15■□□□□ 0.5
HERC4-212ENST00000505760 TRIM16LQ309B1 348 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 LHFPL1Q86WI0 220 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 PHLDA1Q8WV24 401 aaPredicted RBP18.15■□□□□ 0.5
HERC4-212ENST00000505760 VSIRQ9H7M9 311 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 COPZ2Q9P299 210 aa18.15■□□□□ 0.5
HERC4-212ENST00000505760 IGHV3-66A0A0C4DH42 116 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 C3orf85A0A1B0GTC6 90 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 CORTO00230 105 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 APOHP02749 345 aaPredicted RBP18.14■□□□□ 0.49
HERC4-212ENST00000505760 P0C879 139 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 TBPP20226 339 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 HOXA1P49639 335 aaPredicted RBP18.14■□□□□ 0.49
HERC4-212ENST00000505760 PPP5CP53041 499 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 OR52I2Q8NH67 350 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 MS4A6AQ9H2W1 248 aa18.14■□□□□ 0.49
HERC4-212ENST00000505760 INS-IGF2F8WCM5 200 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 DFFBO76075 338 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 ETV6P41212 452 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 CCDC71LQ8N9Z2 235 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 RNASE11Q8TAA1 199 aaKnown RBP18.13■□□□□ 0.49
HERC4-212ENST00000505760 ZFAND1Q8TCF1 268 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 ZFAND3Q9H8U3 227 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 ENY2Q9NPA8 101 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 EXTL2Q9UBQ6 330 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 MTFP1Q9UDX5 166 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 FRAS1Q86XX4 4008 aa18.13■□□□□ 0.49
HERC4-212ENST00000505760 TMEM50AO95807 157 aa18.12■□□□□ 0.49
HERC4-212ENST00000505760 SP6Q3SY56 376 aa18.12■□□□□ 0.49
HERC4-212ENST00000505760 LILRB2Q8N423 598 aa18.12■□□□□ 0.49
HERC4-212ENST00000505760 OR11H2Q8NH07 326 aa18.12■□□□□ 0.49
HERC4-212ENST00000505760 RRNAD1Q96FB5 475 aaKnown RBP18.12■□□□□ 0.49
HERC4-212ENST00000505760 TMEM231Q9H6L2 316 aa18.12■□□□□ 0.49
HERC4-212ENST00000505760 A0A1B0GU03 582 aa18.11■□□□□ 0.49
HERC4-212ENST00000505760 CA1P00915 261 aaPredicted RBP18.11■□□□□ 0.49
HERC4-212ENST00000505760 RNASE2P10153 161 aaKnown RBP18.11■□□□□ 0.49
HERC4-212ENST00000505760 SCGB2B2Q4G0G5 96 aa18.11■□□□□ 0.49
HERC4-212ENST00000505760 TERB2Q8NHR7 220 aa18.11■□□□□ 0.49
HERC4-212ENST00000505760 C15orf40Q8WUR7 153 aa18.11■□□□□ 0.49
HERC4-212ENST00000505760 SCGB2A1O75556 95 aa18.1■□□□□ 0.49
HERC4-212ENST00000505760 ZNF182P17025 639 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms