RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 GIMAP1Q8WWP7 306 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 SLC25A38Q96DW6 304 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 BSCL2Q96G97 398 aaPredicted RBP4.3□□□□□ -1.72
GYPB-204ENST00000504951 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 TXNL4BQ9NX01 149 aaKnown RBP4.3□□□□□ -1.72
GYPB-204ENST00000504951 SMPXQ9UHP9 88 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 DAPK2Q9UIK4 370 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 X6R8D5 127 aa4.3□□□□□ -1.72
GYPB-204ENST00000504951 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
GYPB-204ENST00000504951 TRAV18A0A075B6X5 111 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 MEIS3P1A6NDR6 274 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 NOTOA8MTQ0 251 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 K7EIM0 57 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 DEFB4AO15263 64 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 RBFOX2O43251 390 aaKnown RBP eCLIP4.29□□□□□ -1.72
GYPB-204ENST00000504951 HPRT1P00492 218 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 PPYP01298 95 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 SERPINE2P07093 398 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 SPP1P10451 314 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 FGF9P31371 208 aaPredicted RBP4.29□□□□□ -1.72
GYPB-204ENST00000504951 TFPI2P48307 235 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 TAS2R31P59538 309 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 FXYD4P59646 89 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 OXA1LQ15070 435 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 SLC25A24Q6NUK1 477 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 SFXN4Q6P4A7 337 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 HOGA1Q86XE5 327 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 CADM3Q8N126 398 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 GDPD1Q8N9F7 314 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 BEST4Q8NFU0 473 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 OR51H1Q8NH63 302 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 OR10C1Q96KK4 312 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 CNBD2Q96M20 576 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 RNF2Q99496 336 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 NEU1Q99519 415 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 AIFM2Q9BRQ8 373 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 C20orf24Q9BUV8 137 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 QTRT1Q9BXR0 403 aaKnown RBP4.29□□□□□ -1.72
GYPB-204ENST00000504951 COMMD5Q9GZQ3 224 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 SLC5A7Q9GZV3 580 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 RHBDL2Q9NX52 303 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 NSG2Q9Y328 171 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 RRP15Q9Y3B9 282 aaKnown RBP4.29□□□□□ -1.72
GYPB-204ENST00000504951 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
GYPB-204ENST00000504951 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 IGHV3-74A0A0B4J1X5 117 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 CHEK1O14757 476 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 CYB5BO43169 146 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 IGHV3-48P01763 117 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 CTSGP08311 255 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 TRAPPC2P0DI81 140 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 TRAPPC2BP0DI82 140 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 NQO2P16083 231 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 GNRHRP30968 328 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 SDC2P34741 201 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 RANBP1P43487 201 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 ARPC4P59998 168 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 MXD1Q05195 221 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 MSMO1Q15800 293 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 THOC7Q6I9Y2 204 aaKnown RBP4.28□□□□□ -1.72
GYPB-204ENST00000504951 IZUMO2Q6UXV1 221 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 HSD17B13Q7Z5P4 300 aaPredicted RBP4.28□□□□□ -1.72
GYPB-204ENST00000504951 TMEM17Q86X19 198 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 LYPD1Q8N2G4 141 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 C6orf223Q8N319 242 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 LILRB2Q8N423 598 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 UBAC2Q8NBM4 344 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 DMBX1Q8NFW5 382 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 FCAMRQ8WWV6 532 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 DGCR14Q96DF8 476 aaKnown RBP4.28□□□□□ -1.72
GYPB-204ENST00000504951 HINT2Q9BX68 163 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 PLEKHA2Q9HB19 425 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 C21orf62Q9NYP8 219 aa4.28□□□□□ -1.72
GYPB-204ENST00000504951 F11RQ9Y624 299 aaKnown RBP4.28□□□□□ -1.72
GYPB-204ENST00000504951 NACAE9PAV3 2078 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 IGHV7-4-1A0A0J9YVY3 117 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TEX48A0A1B0GUV7 120 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TMEM189A5PLL7 270 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 SMIM9A6NGZ8 99 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 MARCH11A6NNE9 402 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 PGLYRP1O75594 196 aaPredicted RBP4.27□□□□□ -1.73
GYPB-204ENST00000504951 KRASP01116 189 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 APOHP02749 345 aaPredicted RBP4.27□□□□□ -1.73
GYPB-204ENST00000504951 RLN1P04808 185 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 PSMB9P28065 219 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 G6PCP35575 357 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 LPAR6P43657 344 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 RFX2P48378 723 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 CATR1Q13166 79 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 Q56UQ5 140 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 IDNKQ5T6J7 187 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 AADACL3Q5VUY0 350 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 UBE2UQ5VVX9 321 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms