RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 CCDC32Q9BV29 185 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.2■□□□□ 0.66
PVT1-201ENST00000504719 CACNG5Q9UF02 275 aa19.2■□□□□ 0.66
PVT1-201ENST00000504719 C2orf70A6NJV1 201 aa19.19■□□□□ 0.66
PVT1-201ENST00000504719 SRPXP78539 464 aa19.19■□□□□ 0.66
PVT1-201ENST00000504719 LYZL2Q7Z4W2 148 aa19.19■□□□□ 0.66
PVT1-201ENST00000504719 LGI3Q8N145 548 aa19.19■□□□□ 0.66
PVT1-201ENST00000504719 OR1L6Q8NGR2 347 aa19.19■□□□□ 0.66
PVT1-201ENST00000504719 PLA2G10O15496 165 aa19.18■□□□□ 0.66
PVT1-201ENST00000504719 ERHP84090 104 aaKnown RBP19.18■□□□□ 0.66
PVT1-201ENST00000504719 PPP1R1AQ13522 171 aa19.18■□□□□ 0.66
PVT1-201ENST00000504719 CD300EQ496F6 205 aaPredicted RBP19.18■□□□□ 0.66
PVT1-201ENST00000504719 OR1P1Q8NH06 330 aa19.18■□□□□ 0.66
PVT1-201ENST00000504719 FLVCR2Q9UPI3 526 aa19.18■□□□□ 0.66
PVT1-201ENST00000504719 A0A0B4J2A0 478 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 CLEC3BP05452 202 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 FOLR2P14207 255 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 EDN2P20800 178 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 HOXA1P49639 335 aaPredicted RBP19.17■□□□□ 0.66
PVT1-201ENST00000504719 DEFB114Q30KQ6 69 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 AARDQ4LEZ3 155 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 GTSCR1Q86UQ5 136 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 ZNF114Q8NC26 417 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 ZNF502Q8TBZ5 544 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 RCHY1Q96PM5 261 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 SHPKQ9UHJ6 478 aa19.17■□□□□ 0.66
PVT1-201ENST00000504719 IGHV3-21A0A0B4J1V1 117 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 LYRM1O43325 122 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 SFT2D2O95562 160 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 ANKRD55Q3KP44 614 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 FAM106AQ4KMX7 169 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 VN1R17PQ8TDU5 208 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 DYNLRB2Q8TF09 96 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 ZMAT4Q9H898 229 aa19.16■□□□□ 0.66
PVT1-201ENST00000504719 INS-IGF2F8WCM5 200 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 SULT1A3P0DMM9 295 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 SULT1A4P0DMN0 295 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 SPCS3P61009 180 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 NMSQ5H8A3 153 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 OR52E5Q8NH55 327 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 ENY2Q9NPA8 101 aa19.15■□□□□ 0.66
PVT1-201ENST00000504719 TECRQ9NZ01 308 aaKnown RBP19.15■□□□□ 0.66
PVT1-201ENST00000504719 ZNF785A8K8V0 405 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 GPR183P32249 361 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 SNCAP37840 140 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 UBE2MP61081 183 aaKnown RBP19.14■□□□□ 0.65
PVT1-201ENST00000504719 MISP3Q96FF7 219 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 TM2D3Q9BRN9 247 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 ZC4H2Q9NQZ6 224 aa19.14■□□□□ 0.65
PVT1-201ENST00000504719 PIGBOS1A0A0B4J2F0 54 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 TMEM213A2RRL7 107 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 A8MWP6 167 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 K7EIM0 57 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 NXPH3O95157 252 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 CBLN1P23435 193 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 SCARB1Q8WTV0 552 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 WDR12Q9GZL7 423 aaKnown RBP19.13■□□□□ 0.65
PVT1-201ENST00000504719 TENM3Q9P273 2699 aa19.13■□□□□ 0.65
PVT1-201ENST00000504719 DUXBA0A1W2PPF3 345 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 ZNF320A2RRD8 509 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 ZNF846Q147U1 533 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 SMCO1Q147U7 214 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 LRTM2Q8N967 370 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 CACNG8Q8WXS5 425 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 C21orf62Q9NYP8 219 aa19.12■□□□□ 0.65
PVT1-201ENST00000504719 C9orf170A2RU37 121 aa19.11■□□□□ 0.65
PVT1-201ENST00000504719 ANXA7P20073 488 aaKnown RBP19.11■□□□□ 0.65
PVT1-201ENST00000504719 PLET1Q6UQ28 207 aa19.11■□□□□ 0.65
PVT1-201ENST00000504719 KMT2CQ8NEZ4 4911 aaKnown RBP19.11■□□□□ 0.65
PVT1-201ENST00000504719 DNAH7Q8WXX0 4024 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 OR2T8A6NH00 312 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 CEBPZOSA8MTT3 80 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 I3L2K1 104 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 TGOLN2O43493 480 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 OR4E1P0C645 316 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 RNASE2P10153 161 aaKnown RBP19.1■□□□□ 0.65
PVT1-201ENST00000504719 SUB1P53999 127 aaKnown RBP eCLIP19.1■□□□□ 0.65
PVT1-201ENST00000504719 CD81P60033 236 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 UNQ9165/PRO28630Q6UXU0 137 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 PINX1Q96BK5 328 aaKnown RBP19.1■□□□□ 0.65
PVT1-201ENST00000504719 NEURL2Q9BR09 285 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 ZNF436Q9C0F3 470 aaPredicted RBP19.1■□□□□ 0.65
PVT1-201ENST00000504719 C20orf85Q9H1P6 137 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 TUBA4BQ9H853 241 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 CACFD1Q9UGQ2 172 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 STAB2Q8WWQ8 2551 aa19.1■□□□□ 0.65
PVT1-201ENST00000504719 A0A1B0GU03 582 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 MT-CO2P00403 227 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 TM4SF20Q53R12 229 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 UBAC2Q8NBM4 344 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 UXS1Q8NBZ7 420 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 ATP6V0BQ99437 205 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 PALMDQ9NP74 551 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 HEYLQ9NQ87 328 aaPredicted RBP19.09■□□□□ 0.65
PVT1-201ENST00000504719 MLXQ9UH92 298 aa19.09■□□□□ 0.65
PVT1-201ENST00000504719 F8W735 103 aaPredicted RBP19.08■□□□□ 0.64
PVT1-201ENST00000504719 IGHV3-48P01763 117 aa19.08■□□□□ 0.64
PVT1-201ENST00000504719 CD7P09564 240 aa19.08■□□□□ 0.64
PVT1-201ENST00000504719 C8orf88P0DMB2 117 aa19.08■□□□□ 0.64
PVT1-201ENST00000504719 TNFRSF9Q07011 255 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms