RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SCGB2A1O75556 95 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 ATG12O94817 140 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 MT-CO2P00403 227 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 EIF4EP06730 217 aaKnown RBP4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 CRYBB3P26998 211 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 PRSS3P35030 304 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 G6PCP35575 357 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 RFX2P48378 723 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 RND3P61587 244 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 MXD1Q05195 221 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 BSXQ3C1V8 233 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 AARDQ4LEZ3 155 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 TMEM69Q5SWH9 247 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 TOMM20LQ6UXN7 152 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF600Q6ZNG1 722 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 TCF24Q7RTU0 167 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 H2BFWTQ7Z2G1 175 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 APRG1Q8IVJ8 170 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 Q8NAQ8 132 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 UBAC2Q8NBM4 344 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 OR5H2Q8NGV7 314 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 SLC25A46Q96AG3 418 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 FXYD6Q9H0Q3 95 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 MS4A6AQ9H2W1 248 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 ZFAND3Q9H8U3 227 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 IFT46Q9NQC8 304 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 CACFD1Q9UGQ2 172 aa4.45□□□□□ -1.7
LSM3P4-201ENST00000502948 K7EQG2 157 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 TMEM50AO95807 157 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 CA1P00915 261 aaPredicted RBP4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 IGKV1-39P01597 117 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 APOA1P02647 267 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 IGKV1D-39P04432 117 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 CLEC2LP0C7M8 214 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 P0C879 139 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 NPPCP23582 126 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 AP2S1P53680 142 aaPredicted RBP4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 SUB1P53999 127 aaKnown RBP eCLIP4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 TAS2R20P59543 309 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 ARRDC1Q8N5I2 433 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 OR4X1Q8NH49 305 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 DCANP1Q8TF63 244 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 RNF126Q9BV68 326 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 HINT2Q9BX68 163 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 NSG2Q9Y328 171 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 SELENOKQ9Y6D0 94 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 U3KQE9 123 aa4.44□□□□□ -1.7
LSM3P4-201ENST00000502948 TRAV10A0A0B4J240 114 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 LOC100506127A0A0U1RQW1 187 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 HELTA6NFD8 242 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 ANKRD65E5RJM6 399 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 DNASE2O00115 360 aaPredicted RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 ST8SIA3O43173 380 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF207O43670 478 aaKnown RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 CLN5O75503 358 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 DEDDO75618 318 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 YIF1AO95070 293 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PMP2P02689 132 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 AMBPP02760 352 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 GIG44P09565 113 aaPredicted RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 TBPP20226 339 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 RCVRNP35243 200 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 HRH1P35367 487 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 SNCAP37840 140 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 RPS19P39019 145 aaKnown RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 HOXA1P49639 335 aaPredicted RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 EIF2B2P49770 351 aaKnown RBP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 TSPAN5P62079 268 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PRR20EP86478 221 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PRR20CP86479 221 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PRR20DP86480 221 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PRR20BP86481 221 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PRR20AP86496 221 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 ZNF124Q15973 351 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 TBC1D26Q86UD7 250 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 LHFPL1Q86WI0 220 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 STHQ8IWL8 128 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 SAMD12Q8N8I0 201 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 ST8SIA2Q92186 375 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 MISP3Q96FF7 219 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 FAM210BQ96KR6 192 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 CLUHP3Q96NS8 147 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 METTL26Q96S19 204 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 NEU1Q99519 415 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 RNF167Q9H6Y7 350 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 PUS1Q9Y606 427 aaKnown RBP eCLIP4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 X6R8D5 127 aa4.43□□□□□ -1.7
LSM3P4-201ENST00000502948 FAT2Q9NYQ8 4349 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 AGRNO00468 2067 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 IGHV3OR16-8A0A075B7F1 116 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 IGHV3-21A0A0B4J1V1 117 aa4.42□□□□□ -1.7
LSM3P4-201ENST00000502948 A0A0B4J293 547 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms