RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 BOD1L1Q8NFC6 3051 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 FER1L5A0AVI2 2057 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR11H12B2RN74 326 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 ZIC3O60481 467 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 CLDN14O95500 239 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 APOA2P02652 100 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 DEFA4P12838 97 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 BCL3P20749 454 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 PPOXP50336 477 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR11H1Q8NG94 326 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR11H2Q8NH07 326 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR4A5Q8NH83 315 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
HPS4-217ENST00000496385 WDR54Q9H977 334 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.49□□□□□ -1.21
HPS4-217ENST00000496385 C15orf62A8K5M9 175 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 CATR1Q13166 79 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 OR2Z1Q8NG97 314 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 OR4X2Q8NGF9 303 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 TAAR6Q96RI8 345 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 JMJD8Q96S16 334 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 GGTLC1Q9BX51 225 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 CLCF1Q9UBD9 225 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 SOX21Q9Y651 276 aaPredicted RBP7.49□□□□□ -1.21
HPS4-217ENST00000496385 TIMM23BQ5SRD1 257 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 DOLPP1Q86YN1 238 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 KIR3DL3Q8N743 410 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 LINC00470Q9BZP3 86 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 IL36RNQ9UBH0 155 aa7.49□□□□□ -1.21
HPS4-217ENST00000496385 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 TSPAN13O95857 204 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 TCL1AP56279 114 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
HPS4-217ENST00000496385 KIR3DS1Q14943 382 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 MRPL21Q7Z2W9 205 aaKnown RBP7.48□□□□□ -1.21
HPS4-217ENST00000496385 CT55Q8WUE5 264 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 RAXQ9Y2V3 346 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 EPG5Q9HCE0 2579 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 EXPH5Q8NEV8 1989 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 A0A1W2PNR3 127 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 FAM90A9PA6NNJ1 464 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 F8W1H4 67 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 K7EQM0 130 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 NEURL1O76050 574 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 IGLV2-8P01709 118 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 MFAP2P55001 183 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 RPL8P62917 257 aaKnown RBP7.48□□□□□ -1.21
HPS4-217ENST00000496385 SLC35B1P78383 322 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 IL11RAQ14626 422 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 FXYD3Q14802 87 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 EFNB3Q15768 340 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 ZNF841Q6ZN19 808 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 SH2D2AQ9NP31 389 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 KCNS2Q9ULS6 477 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 P04436 131 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 WIPI1Q5MNZ9 446 aaPredicted RBP7.48□□□□□ -1.21
HPS4-217ENST00000496385 CCDC144NLQ6NUI1 221 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 H2BFWTQ7Z2G1 175 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 IGF2BP2-AS1Q96M15 143 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 MGST2Q99735 147 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 GEMIN7Q9H840 131 aaKnown RBP7.48□□□□□ -1.21
HPS4-217ENST00000496385 THYN1Q9P016 225 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 ITPR1Q14643 2758 aa7.48□□□□□ -1.21
HPS4-217ENST00000496385 KLK10O43240 276 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 PCBD1P61457 104 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 PSMG4Q5JS54 123 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
HPS4-217ENST00000496385 OR1A1Q9P1Q5 309 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
HPS4-217ENST00000496385 TSSC4Q9Y5U2 329 aaPredicted RBP7.47□□□□□ -1.21
HPS4-217ENST00000496385 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 A0A1W2PRE2 83 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 C2orf72A6NCS6 295 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 SHISA8B8ZZ34 492 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 NPIPA3F8WFD2 350 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 ADH4P08319 380 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 G6PCP35575 357 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 FABP6P51161 128 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 CEACAM21Q3KPI0 293 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 OR52E5Q8NH55 327 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 PERPQ96FX8 193 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 C19orf24Q9BVV8 132 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 KLRF1Q9NZS2 232 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
HPS4-217ENST00000496385 USP24Q9UPU5 2620 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 FNDC10F2Z333 226 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 FAM87AP0C7U9 286 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 CT45A6P0DMU7 189 aa7.46□□□□□ -1.21
HPS4-217ENST00000496385 CT45A5P0DMU8 189 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms