RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TMEM182Q6ZP80 229 aaPredicted RBP5.38□□□□□ -1.55
MSH5-217ENST00000494458 TTC9CQ8N5M4 171 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 LFNGQ8NES3 379 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 OR1L6Q8NGR2 347 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 CITED4Q96RK1 184 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 GGTLC1Q9BX51 225 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 VSIRQ9H7M9 311 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 HIF1ANQ9NWT6 349 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 C1RLQ9NZP8 487 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 KIAA1456Q9P272 454 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 F11RQ9Y624 299 aaKnown RBP5.38□□□□□ -1.55
MSH5-217ENST00000494458 PDZD2O15018 2839 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 NAV2Q8IVL1 2488 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 IGKV1D-37A0A075B6S9 117 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 IGHV7-81A0A0B4J1V7 117 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 UBE2L5PA0A1B0GUS4 154 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 TMEM218A2RU14 115 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 C17orf112F2Z3M2 114 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 I3L2K1 104 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 CORTO00230 105 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 HBE1P02100 147 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 OPN1MWP04001 364 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 AMY1AP04745 511 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 H2AFB1P0C5Y9 115 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 OPN1MW2P0DN77 364 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 OPN1MW3P0DN78 364 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 IGHV4-38-2P0DP08 117 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 AREGP15514 252 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 M6PRP20645 277 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 ZP3P21754 424 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 FGF7P21781 194 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 CCL20P78556 96 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 SRSF3P84103 164 aaKnown RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 MMDQ15546 238 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 MLANAQ16655 118 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 FAM120AOSQ5T036 256 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 OR10G4Q8NGN3 311 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 RCC1LQ96I51 464 aaKnown RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 TMEM68Q96MH6 324 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 ZNF48Q96MX3 618 aaPredicted RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 RBM14Q96PK6 669 aaKnown RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 FOXC2Q99958 501 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 C19orf24Q9BVV8 132 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 HRH4Q9H3N8 390 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 C7orf69Q9H7B7 122 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 ZNF580Q9UK33 172 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 FBXO7Q9Y3I1 522 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 PRRC2AP48634 2157 aaKnown RBP5.37□□□□□ -1.55
MSH5-217ENST00000494458 WNK2Q9Y3S1 2297 aa5.37□□□□□ -1.55
MSH5-217ENST00000494458 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.37□□□□□ -1.55
MSH5-217ENST00000494458 PLXNB1O43157 2135 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 SVEP1Q4LDE5 3571 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 IGLV11-55A0A075B6I3 123 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 A0A0U1RQK1 487 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 CTXND1A0A1B0GTU2 59 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 A6NDX4 124 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 C9JQL5 133 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 AGPAT2O15120 278 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 ACTL6BO94805 426 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 TSPAN15O95858 294 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 TMEM11P17152 192 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 CD24P25063 80 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 PAX6P26367 422 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 FCGR2BP31994 310 aaPredicted RBP5.36□□□□□ -1.55
MSH5-217ENST00000494458 PLP1P60201 277 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 NDPQ00604 133 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 FXYD3Q14802 87 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 TNXAQ16473 311 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 LINC01559Q495D7 138 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 ZNF506Q5JVG8 444 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 Q5PR19 223 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 ETFRF1Q6IPR1 90 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 SSX7Q7RTT5 188 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 SLC16A13Q7RTY0 426 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 C5orf56Q8N8D9 126 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 BPIFCQ8NFQ6 507 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 SGMS2Q8NHU3 365 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 FAM213BQ8TBF2 198 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 SUN5Q8TC36 379 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 LINC00052Q96N35 136 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 KRTAP4-12Q9BQ66 201 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 HINT2Q9BX68 163 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 KCNIP2Q9NS61 270 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 POLQO75417 2590 aa5.36□□□□□ -1.55
MSH5-217ENST00000494458 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 TRBV9A0A0B4J1U6 114 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 I3L521 148 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 K7EIM0 57 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 CYB5BO43169 146 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 PRH1P02810 166 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 STAG3L2P0CL84 134 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 STAG3L3P0CL85 134 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 ADCYAP1P18509 176 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 RAB2AP61019 212 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 SELENOTP62341 195 aa5.35□□□□□ -1.55
MSH5-217ENST00000494458 RAB31Q13636 194 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms