RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CACNG8Q8WXS5 425 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM190Q8WZ59 177 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 MARC2Q969Z3 335 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 MISP3Q96FF7 219 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 GAR1Q9NY12 217 aaKnown RBP17.1■□□□□ 0.33
SNIP1-203ENST00000493916 KCNIP3Q9Y2W7 256 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 UFC1Q9Y3C8 167 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 IGHV4-30-4P0DP06 118 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM187Q14656 261 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 Q56UQ5 140 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 PVRIGQ6DKI7 326 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 OR52E5Q8NH55 327 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 TXN2Q99757 166 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 ASCL2Q99929 193 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 SRRQ9GZT4 340 aa17.09■□□□□ 0.33
SNIP1-203ENST00000493916 IGHV3-35A0A0C4DH35 117 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 NDUFA4O00483 81 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 MT-CO2P00403 227 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 C8orf88P0DMB2 117 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 SNCAP37840 140 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 HOXA1P49639 335 aaPredicted RBP17.08■□□□□ 0.32
SNIP1-203ENST00000493916 SPCS3P61009 180 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 TM4SF20Q53R12 229 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 UBAC2Q8NBM4 344 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 CHRDL1Q9BU40 450 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.08■□□□□ 0.32
SNIP1-203ENST00000493916 C19orf73Q9NVV2 129 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 NDUFA13Q9P0J0 144 aa17.08■□□□□ 0.32
SNIP1-203ENST00000493916 ZNF785A8K8V0 405 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 ADMP35318 185 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 MFAP4P55083 255 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 SUPT4H1P63272 117 aaKnown RBP17.07■□□□□ 0.32
SNIP1-203ENST00000493916 SBSPONQ8IVN8 264 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 UXS1Q8NBZ7 420 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 GPR146Q96CH1 333 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 ENY2Q9NPA8 101 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 MRPL27Q9P0M9 148 aaKnown RBP17.07■□□□□ 0.32
SNIP1-203ENST00000493916 CACNG5Q9UF02 275 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 MLXQ9UH92 298 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 U3KQK5 164 aa17.07■□□□□ 0.32
SNIP1-203ENST00000493916 CTSGP08311 255 aa17.06■□□□□ 0.32
SNIP1-203ENST00000493916 AKR1C4P17516 323 aa17.06■□□□□ 0.32
SNIP1-203ENST00000493916 SUB1P53999 127 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNIP1-203ENST00000493916 ZNF57Q68EA5 555 aaPredicted RBP17.06■□□□□ 0.32
SNIP1-203ENST00000493916 DAZ1Q9NQZ3 744 aaKnown RBP17.06■□□□□ 0.32
SNIP1-203ENST00000493916 CORTO00230 105 aa17.05■□□□□ 0.32
SNIP1-203ENST00000493916 RNASE2P10153 161 aaKnown RBP17.05■□□□□ 0.32
SNIP1-203ENST00000493916 ANXA3P12429 323 aa17.05■□□□□ 0.32
SNIP1-203ENST00000493916 SRPXP78539 464 aa17.05■□□□□ 0.32
SNIP1-203ENST00000493916 RELQ04864 619 aaPredicted RBP17.05■□□□□ 0.32
SNIP1-203ENST00000493916 BSXQ3C1V8 233 aa17.05■□□□□ 0.32
SNIP1-203ENST00000493916 PINX1Q96BK5 328 aaKnown RBP17.05■□□□□ 0.32
SNIP1-203ENST00000493916 SLC25A21Q9BQT8 299 aaPredicted RBP17.05■□□□□ 0.32
SNIP1-203ENST00000493916 CACFD1Q9UGQ2 172 aa17.05■□□□□ 0.32
SNIP1-203ENST00000493916 A0A0B4J2A0 478 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 NUPL2O15504 423 aaKnown RBP17.04■□□□□ 0.32
SNIP1-203ENST00000493916 CD81P60033 236 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 BTNL8Q6UX41 500 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 TMEM61Q8N0U2 210 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 WDR89Q96FK6 387 aaPredicted RBP17.04■□□□□ 0.32
SNIP1-203ENST00000493916 ZNF414Q96IQ9 312 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 PRR13Q9NZ81 148 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 SHPKQ9UHJ6 478 aa17.04■□□□□ 0.32
SNIP1-203ENST00000493916 HUWE1Q7Z6Z7 4374 aaKnown RBP17.03■□□□□ 0.32
SNIP1-203ENST00000493916 PIGBOS1A0A0B4J2F0 54 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 K7EMT4 169 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 SULT1A3P0DMM9 295 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 SULT1A4P0DMN0 295 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 GUCA2BQ16661 112 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 NMSQ5H8A3 153 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 TMED4Q7Z7H5 227 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 LGI3Q8N145 548 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 NEURL2Q9BR09 285 aa17.03■□□□□ 0.32
SNIP1-203ENST00000493916 TRAV25A0A0B4J276 109 aa17.02■□□□□ 0.32
SNIP1-203ENST00000493916 C15orf62A8K5M9 175 aa17.02■□□□□ 0.32
SNIP1-203ENST00000493916 IGHV3-48P01763 117 aa17.02■□□□□ 0.32
SNIP1-203ENST00000493916 TMEM128Q5BJH2 165 aa17.02■□□□□ 0.32
SNIP1-203ENST00000493916 WWC2-AS2Q96NR7 200 aa17.02■□□□□ 0.32
SNIP1-203ENST00000493916 GNG7O60262 68 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 HTR2BP41595 481 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 NPBWR1P48145 328 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 BAK1Q16611 211 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 TRIQKQ629K1 86 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 DUSP18Q8NEJ0 188 aa17.01■□□□□ 0.31
SNIP1-203ENST00000493916 CD7P09564 240 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 CCR6P51684 374 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 LYZL2Q7Z4W2 148 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 OR10C1Q96KK4 312 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 TM2D3Q9BRN9 247 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 C20orf24Q9BUV8 137 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 TUBA4BQ9H853 241 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 SELENOKQ9Y6D0 94 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 STAB2Q8WWQ8 2551 aa17■□□□□ 0.31
SNIP1-203ENST00000493916 TENM3Q9P273 2699 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 DUXBA0A1W2PPF3 345 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 NAP1L6A6NFF2 107 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 CEBPZOSA8MTT3 80 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 INPP1P49441 399 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 SMCO1Q147U7 214 aa16.99■□□□□ 0.31
SNIP1-203ENST00000493916 RBMS2Q15434 407 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms