RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CDK10Q15131 360 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 ALX1Q15699 326 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 TMED4Q7Z7H5 227 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 KRTAP11-1Q8IUC1 163 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF664Q8N3J9 261 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF676Q8N7Q3 588 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 OR4X1Q8NH49 305 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 PHB2Q99623 299 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 SIGMAR1Q99720 223 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 CMSS1Q9BQ75 279 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 MRPL27Q9P0M9 148 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 TAAR3PQ9P1P4 343 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 LAMA4Q16363 1823 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 DOCK5Q9H7D0 1870 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 IGF2RP11717 2491 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 MYH7BA7E2Y1 1941 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 INMT-MINDY4F8WBC2 141 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 SLC25A20O43772 301 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 OR7C1O76099 320 aaPredicted RBP2.61□□□□□ -1.99
GTF3A-208ENST00000493903 FGF6P10767 208 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 POU6F1Q14863 301 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 IAH1Q2TAA2 248 aaPredicted RBP2.61□□□□□ -1.99
GTF3A-208ENST00000493903 LPCAT3Q6P1A2 487 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 SLC36A1Q7Z2H8 476 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 GLT6D1Q7Z4J2 308 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 SH2D6Q7Z4S9 175 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 UMODL1-AS1Q8N2C9 162 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 SLC22A24Q8N4F4 322 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 CNBD2Q96M20 576 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 PPP1R2P1Q96PQ5 205 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 KIFC1Q9BW19 673 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ULBP3Q9BZM4 244 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 GPR84Q9NQS5 396 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
GTF3A-208ENST00000493903 IDI2-AS1Q9NZ38 188 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 PRELID1Q9Y255 219 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ANGPT4Q9Y264 503 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF835Q9Y2P0 537 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 KLK5Q9Y337 293 aaPredicted RBP2.61□□□□□ -1.99
GTF3A-208ENST00000493903 U3KQK5 164 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 V9GYQ6 96 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 LOC400499M0QZD8 3231 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ARID1AO14497 2285 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 ITPR1Q14643 2758 aa2.61□□□□□ -1.99
GTF3A-208ENST00000493903 GCN1Q92616 2671 aaKnown RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 COL4A2P08572 1712 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 A0A0D9SFI3 127 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 SLC17A3O00476 420 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 NPPCP23582 126 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 CRABP1P29762 137 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF140P52738 457 aaPredicted RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 RBX1P62877 108 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 RPL19P84098 196 aaKnown RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 PSG4Q00888 419 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 KRR1Q13601 381 aaKnown RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 HTR4Q13639 388 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 S100A7AQ86SG5 101 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 H1FOOQ8IZA3 346 aaPredicted RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 ROPN1LQ96C74 230 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 UPK3BQ9BT76 320 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF443Q9Y2A4 671 aaPredicted RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 COQ4Q9Y3A0 265 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 MAST4O15021 2626 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 MYH6P13533 1939 aa2.6□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF638Q14966 1978 aaKnown RBP2.6□□□□□ -1.99
GTF3A-208ENST00000493903 FREM2Q5SZK8 3169 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 IGLV2-18A0A075B6J9 118 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 DHRS12A0PJE2 317 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 A8MWP6 167 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 COX7A2LO14548 114 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 INAFM2P0DMQ5 153 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 TSPEAR-AS2P59090 65 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 SNRPD2P62316 118 aaKnown RBP2.59□□□□□ -1.99
GTF3A-208ENST00000493903 DHRS2Q13268 280 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 SLC9A3R2Q15599 337 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 SNCBQ16143 134 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 TEX36Q5VZQ5 186 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 HMGN2P46Q86SG4 172 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 LYG2Q86SG7 212 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 OOSP2Q86WS3 158 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 OR2T4Q8NH00 348 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 OR4K13Q8NH42 304 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 MCFD2Q8NI22 146 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 FNDC9Q8TBE3 224 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 C12orf43Q96C57 262 aaKnown RBP2.59□□□□□ -1.99
GTF3A-208ENST00000493903 C11orf1Q9H5F2 150 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 CXorf21Q9HAI6 301 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 PRTFDC1Q9NRG1 225 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 ARMC1Q9NVT9 282 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 VPREB3Q9UKI3 123 aa2.59□□□□□ -1.99
GTF3A-208ENST00000493903 COL1A2P08123 1366 aa2.59□□□□□ -2
GTF3A-208ENST00000493903 NBEAQ8NFP9 2946 aa2.58□□□□□ -2
GTF3A-208ENST00000493903 FLNBO75369 2602 aaKnown RBP2.58□□□□□ -2
GTF3A-208ENST00000493903 CNOT1A5YKK6 2376 aaKnown RBP2.58□□□□□ -2
GTF3A-208ENST00000493903 AKAP13Q12802 2813 aa2.58□□□□□ -2
GTF3A-208ENST00000493903 LAMA5O15230 3695 aa2.58□□□□□ -2
GTF3A-208ENST00000493903 IGKV1D-37A0A075B6S9 117 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms