RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SSMEM1Q8WWF3 244 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 EAF1Q96JC9 268 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-216ENST00000492977 TBX15Q96SF7 602 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 LPAR2Q9HBW0 351 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 MANBALQ9NQG1 85 aa11.23□□□□□ -0.61
PTPN7-216ENST00000492977 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
PTPN7-216ENST00000492977 AVPP01185 164 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 LINC00869P0C866 280 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 COX6B1P14854 86 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 PSMB3P49720 205 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 GNB1P62873 340 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 EBI3Q14213 229 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 MLANAQ16655 118 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 MALSU1Q96EH3 234 aa11.22□□□□□ -0.61
PTPN7-216ENST00000492977 SPTAN1Q13813 2472 aaKnown RBP11.21□□□□□ -0.61
PTPN7-216ENST00000492977 AKAP6Q13023 2319 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 CORTO00230 105 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 TSPAN9O75954 239 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 PAX1P15863 534 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 RHOBP62745 196 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTPN7-216ENST00000492977 OR1P1Q8NH06 330 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
PTPN7-216ENST00000492977 C19orf24Q9BVV8 132 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 TMA7Q9Y2S6 64 aaKnown RBP11.21□□□□□ -0.61
PTPN7-216ENST00000492977 PLXNB1O43157 2135 aa11.21□□□□□ -0.61
PTPN7-216ENST00000492977 FCN1O00602 326 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 EIF3GO75821 320 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 REG1AP05451 166 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 FBP1P09467 338 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 OR10J1P30954 320 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 DSCR9P59020 149 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 PAX8Q06710 450 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 HES1Q14469 280 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 DYNAPQ8N1N2 210 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 IGHV4-61A0A0C4DH41 118 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 M0R036 132 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 NUPL2O15504 423 aaKnown RBP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 CNIH1O95406 144 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 CXorf1O96002 111 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 CRYGCP07315 174 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 DEFA4P12838 97 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 AREGP15514 252 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 RHEBQ15382 184 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 Q8N6K4 173 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 NANPQ8TBE9 248 aa11.2□□□□□ -0.62
PTPN7-216ENST00000492977 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
PTPN7-216ENST00000492977 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 MT-CO2P00403 227 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 CEBPGP53567 150 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 AWAT1Q58HT5 328 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 ABHD5Q8WTS1 349 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 ACY3Q96HD9 319 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
PTPN7-216ENST00000492977 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPN7-216ENST00000492977 USP9XQ93008 2570 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-216ENST00000492977 C7orf77A4D0Y5 90 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 TMEM250H0YL14 139 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 H3BQ15 152 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 TSPAN4O14817 238 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 CD24P25063 80 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 BRS3P32247 399 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 MFAP2P55001 183 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 CD81P60033 236 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 SELENOTP62341 195 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 FAM90A2PQ658T7 463 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 TMEM88Q6PEY1 159 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 MISP3Q96FF7 219 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 AJUBAQ96IF1 538 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 RPS10P5Q9NQ39 176 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
PTPN7-216ENST00000492977 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 NPFFO15130 113 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 PAGE4O60829 102 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 ARL14EPLP0DKL9 152 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 PAX6P26367 422 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 SAA4P35542 130 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 FXYD3Q14802 87 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
PTPN7-216ENST00000492977 CBLN2Q8IUK8 224 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms