RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 SRRM4A7MD48 611 aaKnown RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 ZNF705EA8MWA4 302 aaPredicted RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 ANKRD65E5RJM6 399 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 NUPL2O15504 423 aaKnown RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 IGLV2-23P01705 113 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 CRYGBP07316 175 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 TRAPPC2P0DI81 140 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 TRAPPC2BP0DI82 140 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 HTN3P15516 51 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PTBP1P26599 531 aaKnown RBP eCLIP3.79□□□□□ -1.8
SEC13-219ENST00000492602 SDC2P34741 201 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PRSS3P35030 304 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 SNCAP37840 140 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 EIF2B2P49770 351 aaKnown RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 OR10A3P58181 314 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 ERHP84090 104 aaKnown RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 MXD1Q05195 221 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 AADACL3Q5VUY0 350 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 UBE2UQ5VVX9 321 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 SFXN4Q6P4A7 337 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 ZNF773Q6PK81 442 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 CLEC19AQ6UXS0 136 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 HOGA1Q86XE5 327 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 SPARTQ8N0X7 666 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 VN1R17PQ8TDU5 208 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 GFI1Q99684 422 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PDCD10Q9BUL8 212 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 HINT2Q9BX68 163 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 QTRT1Q9BXR0 403 aaKnown RBP3.79□□□□□ -1.8
SEC13-219ENST00000492602 PLEKHA2Q9HB19 425 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 ENY2Q9NPA8 101 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 BET1LQ9NYM9 111 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PFDN2Q9UHV9 154 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PRNDQ9UKY0 176 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 KCNK7Q9Y2U2 307 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 TNXBP22105 4242 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 A0A087WXM4 84 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 A0A1W2PPQ1 181 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 LINC00473A8K010 186 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 FOXI3A8MTJ6 420 aaPredicted RBP3.78□□□□□ -1.8
SEC13-219ENST00000492602 DNASE2O00115 360 aaPredicted RBP3.78□□□□□ -1.8
SEC13-219ENST00000492602 SULT1C2O00338 296 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 LCE2BO14633 110 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 YIF1AO95070 293 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 IGHV3-23P01764 117 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 OR13C7P0DN81 318 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 GCSHP23434 173 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 F2RP25116 425 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 TFPI2P48307 235 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 MFAP4P55083 255 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 FXYD4P59646 89 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 RPL11P62913 178 aaKnown RBP3.78□□□□□ -1.8
SEC13-219ENST00000492602 TMEM69Q5SWH9 247 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 C10orf55Q5SWW7 151 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 LELP1Q5T871 98 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 TMEM88Q6PEY1 159 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 DHRS11Q6UWP2 260 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 H2BFWTQ7Z2G1 175 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 VKORC1L1Q8N0U8 176 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 LILRB2Q8N423 598 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 OR13F1Q8NGS4 319 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 OR51H1Q8NH63 302 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 AP3S1Q92572 193 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
SEC13-219ENST00000492602 ATP6V0BQ99437 205 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 TMEM231Q9H6L2 316 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 EHFQ9NZC4 300 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 COMMD9Q9P000 198 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 TBC1D24Q9ULP9 559 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 OR51B2Q9Y5P1 312 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 S4R3C0 116 aa3.78□□□□□ -1.8
SEC13-219ENST00000492602 HMX3A6NHT5 357 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 GPR31O00270 319 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 UPK2O00526 184 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 TNFSF12O43508 249 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 TNFAIP8O95379 198 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 ATP6V1G2O95670 118 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 KRASP01116 189 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 PPYP01298 95 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 CRYGCP07315 174 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 CTSDP07339 412 aaPredicted RBP3.77□□□□□ -1.81
SEC13-219ENST00000492602 P0C879 139 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 ZNF735P0CB33 412 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 SPART-AS1P0CW21 52 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 RCVRNP35243 200 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 NPBWR1P48145 328 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 RORCP51449 518 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 NEDD8Q15843 81 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 Q56UQ5 140 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 UBE2NLQ5JXB2 153 aa3.77□□□□□ -1.81
SEC13-219ENST00000492602 MORN3Q6PF18 240 aaPredicted RBP3.77□□□□□ -1.81
SEC13-219ENST00000492602 NOXA1Q86UR1 476 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms