RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 MISP3Q96FF7 219 aa13.46□□□□□ -0.25
LMNB1-206ENST00000492190 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
LMNB1-206ENST00000492190 C21orf62Q9NYP8 219 aa13.46□□□□□ -0.25
LMNB1-206ENST00000492190 ZMAT5Q9UDW3 170 aaKnown RBP13.46□□□□□ -0.25
LMNB1-206ENST00000492190 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 LGALS9O00182 355 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 TGOLN2O43493 480 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 NXPH3O95157 252 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 IGHV3-48P01763 117 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 SULT1A3P0DMM9 295 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 SULT1A4P0DMN0 295 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 ANXA3P12429 323 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 VAMP1P23763 118 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 ADMP35318 185 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 HOXA1P49639 335 aaPredicted RBP13.45□□□□□ -0.26
LMNB1-206ENST00000492190 BSXQ3C1V8 233 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 CHRDL1Q9BU40 450 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 PDCD10Q9BUL8 212 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 SIGLEC8Q9NYZ4 499 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 PTTG2Q9NZH5 202 aa13.45□□□□□ -0.26
LMNB1-206ENST00000492190 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
LMNB1-206ENST00000492190 MT-CO2P00403 227 aa13.44□□□□□ -0.26
LMNB1-206ENST00000492190 SRPXP78539 464 aa13.44□□□□□ -0.26
LMNB1-206ENST00000492190 UNQ9165/PRO28630Q6UXU0 137 aa13.44□□□□□ -0.26
LMNB1-206ENST00000492190 TMEM213A2RRL7 107 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 IZUMO1RA6ND01 250 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 C2orf70A6NJV1 201 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 CENPXA8MT69 81 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 LYRM1O43325 122 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 LY86O95711 162 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 SNCAP37840 140 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 UBE2MP61081 183 aaKnown RBP13.43□□□□□ -0.26
LMNB1-206ENST00000492190 SMCO1Q147U7 214 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 DEFB121Q5J5C9 76 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 PLET1Q6UQ28 207 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 TMEM170AQ8WVE7 144 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 CACNG8Q8WXS5 425 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 PINX1Q96BK5 328 aaKnown RBP13.43□□□□□ -0.26
LMNB1-206ENST00000492190 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 CCDC32Q9BV29 185 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 ZNF436Q9C0F3 470 aaPredicted RBP13.43□□□□□ -0.26
LMNB1-206ENST00000492190 PEMTQ9UBM1 199 aa13.43□□□□□ -0.26
LMNB1-206ENST00000492190 C9orf170A2RU37 121 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 A8MWP6 167 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 CTSGP08311 255 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 FOLR2P14207 255 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 GP9P14770 177 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 ANXA7P20073 488 aaKnown RBP13.42□□□□□ -0.26
LMNB1-206ENST00000492190 FAM106AQ4KMX7 169 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 UBAC2Q8NBM4 344 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 BSCL2Q96G97 398 aaPredicted RBP13.42□□□□□ -0.26
LMNB1-206ENST00000492190 FNDC4Q9H6D8 234 aaPredicted RBP13.42□□□□□ -0.26
LMNB1-206ENST00000492190 ENY2Q9NPA8 101 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 BATF3Q9NR55 127 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 MRPL36Q9P0J6 103 aaKnown RBP13.42□□□□□ -0.26
LMNB1-206ENST00000492190 HSPB7Q9UBY9 170 aa13.42□□□□□ -0.26
LMNB1-206ENST00000492190 DUXBA0A1W2PPF3 345 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 ZNF320A2RRD8 509 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 CEBPZOSA8MTT3 80 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 PITX3O75364 302 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
LMNB1-206ENST00000492190 TNFRSF9Q07011 255 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 MLANAQ16655 118 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 TM4SF20Q53R12 229 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 Q56UQ5 140 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 SPSB3Q6PJ21 355 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 HEYLQ9NQ87 328 aaPredicted RBP13.41□□□□□ -0.26
LMNB1-206ENST00000492190 TBC1D24Q9ULP9 559 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 SELENOKQ9Y6D0 94 aa13.41□□□□□ -0.26
LMNB1-206ENST00000492190 HUWE1Q7Z6Z7 4374 aaKnown RBP13.41□□□□□ -0.26
LMNB1-206ENST00000492190 A0A1B0GU03 582 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 OR4E1P0C645 316 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 MFAP4P55083 255 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 DHRS2Q13268 280 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 TMEM190Q8WZ59 177 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 RBKSQ9H477 322 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 TENM3Q9P273 2699 aa13.4□□□□□ -0.26
LMNB1-206ENST00000492190 HOXB5P09067 269 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 CBLN1P23435 193 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 SUB1P53999 127 aaKnown RBP eCLIP13.39□□□□□ -0.27
LMNB1-206ENST00000492190 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 CD300EQ496F6 205 aaPredicted RBP13.39□□□□□ -0.27
LMNB1-206ENST00000492190 C2orf83Q53S99 150 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 OR1S1Q8NH92 325 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 TXN2Q99757 166 aa13.39□□□□□ -0.27
LMNB1-206ENST00000492190 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 ADAP1O75689 374 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 TCRBP04435 133 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 HTR2BP41595 481 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 IFITM3Q01628 133 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 GGNBP1Q5YKI7 109 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 Q8N1Y9 231 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 OR52B4Q8NGK2 314 aa13.38□□□□□ -0.27
LMNB1-206ENST00000492190 C20orf85Q9H1P6 137 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms