RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SNCAP37840 140 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 MZT2AQ6P582 158 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 APRG1Q8IVJ8 170 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 ZNF114Q8NC26 417 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 LINC00476Q8WZB0 136 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 PDCD10Q9BUL8 212 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 FUNDC2Q9BWH2 189 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 NXF2Q9GZY0 626 aaKnown RBP14.6□□□□□ -0.07
SREBF1-216ENST00000490796 MAP6D1Q9H9H5 199 aa14.6□□□□□ -0.07
SREBF1-216ENST00000490796 M0QYG6 137 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 HPGDSO60760 199 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 IGKV1-39P01597 117 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 IGKV1D-39P04432 117 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 ELK1P19419 428 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 NPBWR1P48145 328 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 RORCP51449 518 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 AKR1C2P52895 323 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 RNASE12Q5GAN4 147 aaKnown RBP14.59□□□□□ -0.07
SREBF1-216ENST00000490796 RNASE10Q5GAN6 216 aaKnown RBP14.59□□□□□ -0.07
SREBF1-216ENST00000490796 CEMP1Q6PRD7 247 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-216ENST00000490796 SLC35G3Q8N808 338 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 DUSP18Q8NEJ0 188 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 OR10C1Q96KK4 312 aa14.59□□□□□ -0.07
SREBF1-216ENST00000490796 IGHV3OR16-13A0A075B7E8 117 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 IGHV3-74A0A0B4J1X5 117 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 MPTX1A8MV57 137 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 IFNA17P01571 189 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 CD5P06127 495 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 SPINK9Q5DT21 86 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 GBGT1Q8N5D6 347 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 ZNF486Q96H40 463 aaPredicted RBP14.58□□□□□ -0.08
SREBF1-216ENST00000490796 CSTL1Q9H114 145 aa14.58□□□□□ -0.08
SREBF1-216ENST00000490796 DNASE2O00115 360 aaPredicted RBP14.57□□□□□ -0.08
SREBF1-216ENST00000490796 ATF4P18848 351 aaPredicted RBP14.57□□□□□ -0.08
SREBF1-216ENST00000490796 SUB1P53999 127 aaKnown RBP eCLIP14.57□□□□□ -0.08
SREBF1-216ENST00000490796 RPL11P62913 178 aaKnown RBP14.57□□□□□ -0.08
SREBF1-216ENST00000490796 EWSR1Q01844 656 aaKnown RBP eCLIP14.57□□□□□ -0.08
SREBF1-216ENST00000490796 TCF24Q7RTU0 167 aa14.57□□□□□ -0.08
SREBF1-216ENST00000490796 AP3S1Q92572 193 aa14.57□□□□□ -0.08
SREBF1-216ENST00000490796 ENY2Q9NPA8 101 aa14.57□□□□□ -0.08
SREBF1-216ENST00000490796 ST8SIA3O43173 380 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 PI3P19957 117 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 PIGPP57054 158 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 RND3P61587 244 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 IZUMO4Q1ZYL8 232 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 TRIM16LQ309B1 348 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 RNASE11Q8TAA1 199 aaKnown RBP14.56□□□□□ -0.08
SREBF1-216ENST00000490796 COPZ2Q9P299 210 aa14.56□□□□□ -0.08
SREBF1-216ENST00000490796 SCGB2A1O75556 95 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 HOXA1P49639 335 aaPredicted RBP14.55□□□□□ -0.08
SREBF1-216ENST00000490796 TOMM20LQ6UXN7 152 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 ARRDC1Q8N5I2 433 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 CCDC71LQ8N9Z2 235 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 GATAD1Q8WUU5 269 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 RRNAD1Q96FB5 475 aaKnown RBP14.55□□□□□ -0.08
SREBF1-216ENST00000490796 TMEM231Q9H6L2 316 aa14.55□□□□□ -0.08
SREBF1-216ENST00000490796 C3orf85A0A1B0GTC6 90 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 CORTO00230 105 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 ZNF124Q15973 351 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 ZNF600Q6ZNG1 722 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 ZFAND1Q8TCF1 268 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 C15orf40Q8WUR7 153 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 RARRES2Q99969 163 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 EXTL2Q9UBQ6 330 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 KLK11Q9UBX7 282 aa14.54□□□□□ -0.08
SREBF1-216ENST00000490796 PUS1Q9Y606 427 aaKnown RBP eCLIP14.54□□□□□ -0.08
SREBF1-216ENST00000490796 IGKV1-5P01602 117 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 CD3DP04234 171 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 TBPP20226 339 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 PPP5CP53041 499 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 OR52I2Q8NH67 350 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 ST8SIA2Q92186 375 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 TP53RKQ96S44 253 aa14.53□□□□□ -0.08
SREBF1-216ENST00000490796 A0A0B4J293 547 aa14.52□□□□□ -0.09
SREBF1-216ENST00000490796 IGHV3-66A0A0C4DH42 116 aa14.52□□□□□ -0.09
SREBF1-216ENST00000490796 SCGB2B2Q4G0G5 96 aa14.52□□□□□ -0.09
SREBF1-216ENST00000490796 FAM90A2PQ658T7 463 aa14.52□□□□□ -0.09
SREBF1-216ENST00000490796 PHLDA1Q8WV24 401 aaPredicted RBP14.52□□□□□ -0.09
SREBF1-216ENST00000490796 NARS2Q96I59 477 aaKnown RBP14.52□□□□□ -0.09
SREBF1-216ENST00000490796 A0A1W2PS18 150 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 DFFBO76075 338 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 TMEM50AO95807 157 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 CA1P00915 261 aaPredicted RBP14.51□□□□□ -0.09
SREBF1-216ENST00000490796 ZNF182P17025 639 aaPredicted RBP14.51□□□□□ -0.09
SREBF1-216ENST00000490796 NPPCP23582 126 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 OPRK1P41145 380 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 ETV6P41212 452 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 LHFPL1Q86WI0 220 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 OR11H2Q8NH07 326 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 ZNF414Q96IQ9 312 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 MFFQ9GZY8 342 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 MS4A6AQ9H2W1 248 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 VSIRQ9H7M9 311 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 MTFP1Q9UDX5 166 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 RABAC1Q9UI14 185 aa14.51□□□□□ -0.09
SREBF1-216ENST00000490796 INS-IGF2F8WCM5 200 aa14.5□□□□□ -0.09
SREBF1-216ENST00000490796 IFNA4P05014 189 aa14.5□□□□□ -0.09
SREBF1-216ENST00000490796 DEFB131AP59861 70 aa14.5□□□□□ -0.09
SREBF1-216ENST00000490796 SP6Q3SY56 376 aa14.5□□□□□ -0.09
SREBF1-216ENST00000490796 TERB2Q8NHR7 220 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms