RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 OR2H2O95918 312 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 PRM2P04554 102 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 HTR1AP08908 422 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 NPPCP23582 126 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 NFYBP25208 207 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 SRIP30626 198 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 CCL20P78556 96 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR8G1Q15617 311 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 MRPL51Q4U2R6 128 aaKnown RBP2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 MORN2Q502X0 79 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 AADACL3Q5VUY0 350 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 LCA10Q71F78 164 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZFP62Q8NB50 900 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 RPS4Y2Q8TD47 263 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 RNASE6Q93091 150 aaKnown RBP2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 BORCS8Q96FH0 119 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 GPX7Q96SL4 187 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 TM2D3Q9BRN9 247 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 SMIM3Q9BZL3 60 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 AICDAQ9GZX7 198 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 TUBA4BQ9H853 241 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 RNF122Q9H9V4 155 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 IL36BQ9NZH7 164 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 HIGD1AQ9Y241 93 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRAPPC1Q9Y5R8 145 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 TSPOAP1O95153 1857 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 TECPR2O15040 1411 aa2.51□□□□□ -2.01
HMGB1P38-201ENST00000490557 SCN10AQ9Y5Y9 1956 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 AHDC1Q5TGY3 1603 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGKV1D-43A0A0B4J1Z2 117 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRAV5A0A0B4J249 113 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 DHRS12A0PJE2 317 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TLCD2A6NGC4 264 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 C1orf196B1AJZ1 125 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 FAM25AB3EWG3 89 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 FAM25CB3EWG5 89 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 FAM25GB3EWG6 89 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 OVOL1O14753 267 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TAX1BP3O14907 124 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZNF73O43830 326 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 SCTP09683 121 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 CGB3P0DN86 165 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 CGB7P0DN87 165 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 NTF3P20783 257 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 EVI2AP22794 236 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 CRYBB3P26998 211 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 EVX1P49640 407 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 KLF3P57682 345 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TSPEAR-AS2P59090 65 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TAS2R30P59541 319 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TAS2R20P59543 309 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 RRAS2P62070 204 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 HIST1H1AQ02539 215 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 FUT5Q11128 374 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 EIF3IQ13347 325 aaKnown RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 RRN3P1Q2M238 152 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 BCL2L15Q5TBC7 163 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 RASL11AQ6T310 242 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZFAND2AQ8N6M9 145 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 LINC00304Q8N9R0 145 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 ST20-AS1Q8NBB2 130 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 APCDD1LQ8NCL9 501 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR51T1Q8NGJ9 327 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR4C16Q8NGL9 310 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR5C1Q8NGR4 320 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR4K15Q8NH41 348 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 C12orf57Q99622 126 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 MGLLQ99685 303 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC25A21Q9BQT8 299 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TCEAL7Q9BRU2 100 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 DERL1Q9BUN8 251 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 YIPF3Q9GZM5 350 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 TP73-AS1Q9UF72 201 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 KLK5Q9Y337 293 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 SCN1AP35498 2009 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 YLPM1P49750 1951 aaKnown RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 NEO1Q92859 1461 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 DOCK5Q9H7D0 1870 aa2.5□□□□□ -2.01
HMGB1P38-201ENST00000490557 KIF1BO60333 1816 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRIP11Q15643 1979 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 A0A087WUU8 490 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 MEIKINA0A087WXM9 373 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 GGT3PA6NGU5 568 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 A8MWP4 228 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 GABARAPH6UMI1 98 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 K7ERU9 68 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC25A20O43772 301 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SH2D1AO60880 128 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 DPM2O94777 84 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 NDUFB2O95178 105 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 IFNGP01579 166 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGKV1D-33P01593 117 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGKV1-33P01594 117 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGKV1-5P01602 117 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRGV3P03979 118 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRGC2P03986 189 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 UCHL1P09936 223 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC25A16P16260 332 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms