RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 OR4A16Q8NH70 328 aa13.12□□□□□ -0.31
YIPF3-208ENST00000490447 GATAD1Q8WUU5 269 aa13.12□□□□□ -0.31
YIPF3-208ENST00000490447 OR10C1Q96KK4 312 aa13.12□□□□□ -0.31
YIPF3-208ENST00000490447 TXN2Q99757 166 aa13.12□□□□□ -0.31
YIPF3-208ENST00000490447 RARRES2Q99969 163 aa13.12□□□□□ -0.31
YIPF3-208ENST00000490447 IGHV3-49A0A0A0MS15 119 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 GNG7O60262 68 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 NAT1P18440 290 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 HLA-DMAP28067 261 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 TGFBR1P36897 503 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 RPS19P39019 145 aaKnown RBP13.11□□□□□ -0.31
YIPF3-208ENST00000490447 RORCP51449 518 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 ZNF124Q15973 351 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 DYNC2LI1Q8TCX1 351 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
YIPF3-208ENST00000490447 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
YIPF3-208ENST00000490447 DBX1A6NMT0 343 aa13.1□□□□□ -0.31
YIPF3-208ENST00000490447 TBC1D26Q86UD7 250 aa13.1□□□□□ -0.31
YIPF3-208ENST00000490447 NXF2Q9GZY0 626 aaKnown RBP13.1□□□□□ -0.31
YIPF3-208ENST00000490447 MFFQ9GZY8 342 aa13.1□□□□□ -0.31
YIPF3-208ENST00000490447 FAM212BQ9NTI7 297 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-208ENST00000490447 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
YIPF3-208ENST00000490447 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 I3L2K1 104 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 MT-CO2P00403 227 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 CD5P06127 495 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 ERHP84090 104 aaKnown RBP13.09□□□□□ -0.31
YIPF3-208ENST00000490447 PRCDQ00LT1 54 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 GBGT1Q8N5D6 347 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 RPP25LQ8N5L8 163 aaKnown RBP13.09□□□□□ -0.31
YIPF3-208ENST00000490447 ZNF114Q8NC26 417 aa13.09□□□□□ -0.31
YIPF3-208ENST00000490447 IFNA4P05014 189 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 ZNF182P17025 639 aaPredicted RBP13.08□□□□□ -0.32
YIPF3-208ENST00000490447 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
YIPF3-208ENST00000490447 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 AP3S1Q92572 193 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 SEC22AQ96IW7 307 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
YIPF3-208ENST00000490447 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
YIPF3-208ENST00000490447 ST8SIA3O43173 380 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 DEDDO75618 318 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
YIPF3-208ENST00000490447 IGHV3-48P01763 117 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 LYSMD2Q8IV50 215 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
YIPF3-208ENST00000490447 PTTG2Q9NZH5 202 aa13.07□□□□□ -0.32
YIPF3-208ENST00000490447 NPBWR1P48145 328 aa13.06□□□□□ -0.32
YIPF3-208ENST00000490447 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
YIPF3-208ENST00000490447 HSPE1P61604 102 aaKnown RBP13.06□□□□□ -0.32
YIPF3-208ENST00000490447 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
YIPF3-208ENST00000490447 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
YIPF3-208ENST00000490447 DUSP18Q8NEJ0 188 aa13.06□□□□□ -0.32
YIPF3-208ENST00000490447 IGKV1-39P01597 117 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 IGKV1D-39P04432 117 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 SNCAP37840 140 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 GPX8Q8TED1 209 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 MS4A6AQ9H2W1 248 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 SCPEP1Q9HB40 452 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 COMMD3Q9UBI1 195 aa13.05□□□□□ -0.32
YIPF3-208ENST00000490447 DNAH10Q8IVF4 4471 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 DFFBO76075 338 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 RCVRNP35243 200 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 UCP3P55916 312 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 TMEM187Q14656 261 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 MZT2AQ6P582 158 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 SLC35G3Q8N808 338 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 MCFD2Q8NI22 146 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 PDCD10Q9BUL8 212 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 SLIRPQ9GZT3 109 aaKnown RBP13.04□□□□□ -0.32
YIPF3-208ENST00000490447 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
YIPF3-208ENST00000490447 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
YIPF3-208ENST00000490447 AKR1C2P52895 323 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 DEFB131AP59861 70 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 SPINK9Q5DT21 86 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 STHQ8IWL8 128 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 VSIRQ9H7M9 311 aa13.03□□□□□ -0.32
YIPF3-208ENST00000490447 IGHV3-66A0A0C4DH42 116 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 ATG12O94817 140 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 IFNA17P01571 189 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 APOA1P02647 267 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 PGAM2P15259 253 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.33
YIPF3-208ENST00000490447 RABAC1Q9UI14 185 aa13.02□□□□□ -0.33
YIPF3-208ENST00000490447 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
YIPF3-208ENST00000490447 CORTO00230 105 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms