RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 CORTO00230 105 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 PLXNB1O43157 2135 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 ATP5J2P56134 94 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 MMDQ15546 238 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 AJUBAQ96IF1 538 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 USP9XQ93008 2570 aaPredicted RBP10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 FBP1P09467 338 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 OR10J1P30954 320 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 DSCR9P59020 149 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 RHOBP62745 196 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 OR2T6Q8NHC8 308 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 TMPRSS5Q9H3S3 457 aa10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 F11RQ9Y624 299 aaKnown RBP10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 SPTAN1Q13813 2472 aaKnown RBP10.85□□□□□ -0.67
RIPPLY3-203ENST00000490393 IGHV4-61A0A0C4DH41 118 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 A0A1W2PRD5 423 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 A0A1W2PRF3 423 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 A0A1W2PRM7 423 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 CXorf1O96002 111 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 COX6B1P14854 86 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 AREGP15514 252 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 CD81P60033 236 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 RHEBQ15382 184 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 FAM90A2PQ658T7 463 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 NANPQ8TBE9 248 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
RIPPLY3-203ENST00000490393 TACC2O95359 2948 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 FLNCQ14315 2725 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 AKAP6Q13023 2319 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 EIF3GO75821 320 aaKnown RBP eCLIP10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 MFAP2P55001 183 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 PLGLAQ15195 96 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 ABHD5Q8WTS1 349 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 H3BQ15 152 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 NUPL2O15504 423 aaKnown RBP10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 REG1AP05451 166 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 DEFA4P12838 97 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 SELENOTP62341 195 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 GNB1P62873 340 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 CYP2G1PQ6ZSU1 146 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 TMEM116Q8NCL8 245 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 C17orf50Q8WW18 174 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 NPIPB3Q92617 1050 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 TXNDC17Q9BRA2 123 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 SEPSECSQ9HD40 501 aaKnown RBP10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
RIPPLY3-203ENST00000490393 COL12A1Q99715 3063 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 WNK2Q9Y3S1 2297 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 IGKV1D-37A0A075B6S9 117 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 MT-CO2P00403 227 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 FAM106CPP0CH98 169 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 CTRB1P17538 263 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 CTRB2Q6GPI1 263 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 ACY3Q96HD9 319 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 TMA7Q9Y2S6 64 aaKnown RBP10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 PUS1Q9Y606 427 aaKnown RBP eCLIP10.82□□□□□ -0.68
RIPPLY3-203ENST00000490393 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 TCRBV4S1A1TA0A5B7 111 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 M0R036 132 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 PAGE4O60829 102 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 CNIH1O95406 144 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 OR5G3P0C626 314 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 CD24P25063 80 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 PAX6P26367 422 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 BRS3P32247 399 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 HES1Q14469 280 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 FXYD3Q14802 87 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 SPNS3Q6ZMD2 512 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 GATAD1Q8WUU5 269 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 TVP23CQ96ET8 276 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 RNF2Q99496 336 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 FUT9Q9Y231 359 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 ZNF462Q96JM2 2506 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 IGHV4-30-2A0A087WSY4 118 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 PSMB11A5LHX3 300 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 TSPAN4O14817 238 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 NPFFO15130 113 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 ARL14EPLP0DKL9 152 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 SAA4P35542 130 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 CBLN2Q8IUK8 224 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 TRGV9Q99603 122 aa10.81□□□□□ -0.68
RIPPLY3-203ENST00000490393 RPS10P5Q9NQ39 176 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms