RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 LYRM7Q5U5X0 104 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 Q6ZS52 159 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 LCA10Q71F78 164 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 BPIFA4PQ86YQ2 179 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 OR52R1Q8NGF1 315 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 DNAJC9Q8WXX5 260 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 LYSMD1Q96S90 227 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 CHST6Q9GZX3 395 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 SLC39A9Q9NUM3 307 aa3.45□□□□□ -1.86
TM9SF3-206ENST00000490192 IGLV10-54A0A075B6I4 117 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 IGKV2-24A0A0C4DH68 120 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 BANF1O75531 89 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 ERGIC3Q9Y282 383 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 TIMM9Q9Y5J7 89 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 MYH3P11055 1940 aa3.44□□□□□ -1.86
TM9SF3-206ENST00000490192 ODF3BA8MYP8 253 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 MSMBP08118 114 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 RNASE2P10153 161 aaKnown RBP3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 DEFA4P12838 97 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 RPS4Y1P22090 263 aaKnown RBP3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 S100A4P26447 101 aaKnown RBP3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 PSMB8P28062 276 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 GABRA4P48169 554 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 SLC35E3Q7Z769 313 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 CLVS1Q8IUQ0 354 aaPredicted RBP3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 FAM24BQ8N5W8 94 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 TERB2Q8NHR7 220 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 PYDC1Q8WXC3 89 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 SERPINI1Q99574 410 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 TMEM70Q9BUB7 260 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 IMUPQ9GZP8 106 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 C19orf12Q9NSK7 152 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 FMN1Q68DA7 1419 aa3.43□□□□□ -1.86
TM9SF3-206ENST00000490192 ZNF106Q9H2Y7 1883 aaKnown RBP3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 TRAV7A0A075B6U4 112 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 SLC22A1O15245 554 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 PPBPP02775 128 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 EIF2B2P49770 351 aaKnown RBP3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 TMEM78Q5T7P6 136 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 DCUN1D2Q6PH85 259 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 OR5J2Q8NH18 312 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 TVP23CQ96ET8 276 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 RNF122Q9H9V4 155 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 PRO0461Q9UI25 63 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 HHLA3Q9XRX5 114 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 YTHDC2Q9H6S0 1430 aaKnown RBP3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 PLXND1Q9Y4D7 1925 aa3.42□□□□□ -1.86
TM9SF3-206ENST00000490192 MYH2Q9UKX2 1941 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 RIIAD1A6NNX1 92 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 CYB5BO43169 146 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 ALX1Q15699 326 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 DYNAPQ8N1N2 210 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 SCGB3A1Q96QR1 104 aa3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 ZCCHC6Q5VYS8 1495 aaKnown RBP3.41□□□□□ -1.86
TM9SF3-206ENST00000490192 SCN9AQ15858 1988 aa3.4□□□□□ -1.86
TM9SF3-206ENST00000490192 ZNF860A6NHJ4 632 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 H7C2G1 150 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 NBEAP1P0C6P0 100 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 PSMD8P48556 350 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 SUPT4H1P63272 117 aaKnown RBP3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 IGFL3Q6UXB1 125 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 MIR17HGQ75NE6 70 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 PHF13Q86YI8 300 aaPredicted RBP3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 RPP25LQ8N5L8 163 aaKnown RBP3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 LINC00304Q8N9R0 145 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 GRPEL2Q8TAA5 225 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 DYDC1Q8WWB3 177 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 MALSU1Q96EH3 234 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 WDR90Q96KV7 1748 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 PBOV1Q9GZY1 135 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 CCDC180Q9P1Z9 1646 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 SLX4Q8IY92 1834 aa3.4□□□□□ -1.87
TM9SF3-206ENST00000490192 PTPRSQ13332 1948 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 TSTD3H0UI37 97 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 ORC5O43913 435 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 CST8O60676 142 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 CSN2P05814 226 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 YPEL3P61236 119 aaPredicted RBP3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 PABPC1L2AQ5JQF8 200 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 TRAPPC6BQ86SZ2 158 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 Q8NDZ9 215 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 TUBA4BQ9H853 241 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 SHROOM3Q8TF72 1996 aa3.39□□□□□ -1.87
TM9SF3-206ENST00000490192 COL1A2P08123 1366 aa3.38□□□□□ -1.87
TM9SF3-206ENST00000490192 NACADO15069 1562 aa3.38□□□□□ -1.87
TM9SF3-206ENST00000490192 MYH11P35749 1972 aa3.38□□□□□ -1.87
TM9SF3-206ENST00000490192 PIAS1O75925 651 aa3.38□□□□□ -1.87
TM9SF3-206ENST00000490192 APOA2P02652 100 aa3.38□□□□□ -1.87
TM9SF3-206ENST00000490192 IGKV1-16P04430 117 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms