RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 NDUFA13Q9P0J0 144 aa8.75□□□□□ -1.01
SFXN3-207ENST00000489434 IGHV3OR16-13A0A075B7E8 117 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 IGHV3-74A0A0B4J1X5 117 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 C11orf94C9JXX5 98 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 I3L2K1 104 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 ST8SIA3O43173 380 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 MT-CO2P00403 227 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 PRSS3P35030 304 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 SNCAP37840 140 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 NPBWR1P48145 328 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 TSPAN5P62079 268 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 PHLDA2Q53GA4 152 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 FAM90A2PQ658T7 463 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 DUSP18Q8NEJ0 188 aa8.74□□□□□ -1.01
SFXN3-207ENST00000489434 TRAV2A0A0B4J234 112 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 DBX1A6NMT0 343 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 IGLL5B9A064 214 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 SCGB2A1O75556 95 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 NAT1P18440 290 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 HRH1P35367 487 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 TAS2R20P59543 309 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 HSPE1P61604 102 aaKnown RBP8.73□□□□□ -1.01
SFXN3-207ENST00000489434 PRCDQ00LT1 54 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 NEDD8Q15843 81 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 TMEM41BQ5BJD5 291 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 STHQ8IWL8 128 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 SAMD12Q8N8I0 201 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 FXYD6Q9H0Q3 95 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 MS4A6AQ9H2W1 248 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 ANAPC10Q9UM13 185 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 VPS13DQ5THJ4 4388 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 HERC2O95714 4834 aa8.73□□□□□ -1.01
SFXN3-207ENST00000489434 A0A1W2PS18 150 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 DEFB4AO15263 64 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 SUB1P53999 127 aaKnown RBP eCLIP8.72□□□□□ -1.01
SFXN3-207ENST00000489434 DEFB131AP59861 70 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 LEMD1Q68G75 181 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 TOMM20LQ6UXN7 152 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 TBC1D26Q86UD7 250 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 ST8SIA2Q92186 375 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 PPP1R14BQ96C90 147 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 NARS2Q96I59 477 aaKnown RBP8.72□□□□□ -1.01
SFXN3-207ENST00000489434 ZNF414Q96IQ9 312 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 SEC22AQ96IW7 307 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 HRH4Q9H3N8 390 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 VSIRQ9H7M9 311 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 RABAC1Q9UI14 185 aa8.72□□□□□ -1.01
SFXN3-207ENST00000489434 HECTD4Q9Y4D8 3996 aa8.71□□□□□ -1.01
SFXN3-207ENST00000489434 SMIM31A0A1B0GVY4 71 aa8.71□□□□□ -1.02
SFXN3-207ENST00000489434 NPPCP23582 126 aa8.71□□□□□ -1.02
SFXN3-207ENST00000489434 SLC35G3Q8N808 338 aa8.71□□□□□ -1.02
SFXN3-207ENST00000489434 MRGPRFQ96AM1 343 aa8.71□□□□□ -1.02
SFXN3-207ENST00000489434 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
SFXN3-207ENST00000489434 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.02
SFXN3-207ENST00000489434 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 CORTO00230 105 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 ATG12O94817 140 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 SPP1P10451 314 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 EIF2B2P49770 351 aaKnown RBP8.7□□□□□ -1.02
SFXN3-207ENST00000489434 MORN3Q6PF18 240 aaPredicted RBP8.7□□□□□ -1.02
SFXN3-207ENST00000489434 LYSMD2Q8IV50 215 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 STXBP6Q8NFX7 210 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 GRAMD2BQ96HH9 432 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 METTL26Q96S19 204 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 PDCD10Q9BUL8 212 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 SCPEP1Q9HB40 452 aa8.7□□□□□ -1.02
SFXN3-207ENST00000489434 AGRNO00468 2067 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 IFNA17P01571 189 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 APOHP02749 345 aaPredicted RBP8.69□□□□□ -1.02
SFXN3-207ENST00000489434 MIFP14174 115 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 AKR1C2P52895 323 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 UCP3P55916 312 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 PRR20EP86478 221 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 PRR20CP86479 221 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 PRR20DP86480 221 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 PRR20BP86481 221 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 PRR20AP86496 221 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 Q8NAQ8 132 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 ENY2Q9NPA8 101 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
SFXN3-207ENST00000489434 TRAV10A0A0B4J240 114 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 IGHV4-28A0A0C4DH34 117 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 TMEM50AO95807 157 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 IGKV1-39P01597 117 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 IGKV1D-39P04432 117 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 PGAM2P15259 253 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 HLA-DMBP28068 263 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 RCVRNP35243 200 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 RPS19P39019 145 aaKnown RBP8.68□□□□□ -1.02
SFXN3-207ENST00000489434 KCTD21Q4G0X4 260 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 SPINK9Q5DT21 86 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 GPX8Q8TED1 209 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 TMEM230Q96A57 120 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms