RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 FAM103A1Q9BTL3 118 aaKnown RBP9.06□□□□□ -0.96
C9orf3-220ENST00000489318 LSM4Q9Y4Z0 139 aaKnown RBP9.06□□□□□ -0.96
C9orf3-220ENST00000489318 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
C9orf3-220ENST00000489318 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
C9orf3-220ENST00000489318 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 MPDU1O75352 247 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 IGF1P05019 195 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 REG1AP05451 166 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 FOSL1P15407 271 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 HNF1AP20823 631 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 RUNX1Q01196 453 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 SLC16A13Q7RTY0 426 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-220ENST00000489318 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 ABHD5Q8WTS1 349 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 SH3BGRL3Q9H299 93 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 SLC25A32Q9H2D1 315 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-220ENST00000489318 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 YAE1D1Q9NRH1 226 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
C9orf3-220ENST00000489318 IGLV11-55A0A075B6I3 123 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 BTBD17A6NE02 478 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 SOX15O60248 233 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 NMBP08949 121 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 FAM157CP0CG43 387 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 SULT1A2P50226 295 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 AKIRIN2Q53H80 203 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 C19orf35Q6ZS72 473 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 IL17RELQ6ZVW7 336 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 LFNGQ8NES3 379 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 SCGB1C1Q8TD33 95 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 NPCDR1Q9BY65 106 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 WNT10AQ9GZT5 417 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 PARP11Q9NR21 331 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
C9orf3-220ENST00000489318 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 I3L2K1 104 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 HOXA3O43365 443 aaPredicted RBP9.03□□□□□ -0.96
C9orf3-220ENST00000489318 BRI3O95415 125 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 APELAP0DMC3 54 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 FGF7P21781 194 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 OPRK1P41145 380 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 RAB5CP51148 216 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 SERF2P84101 59 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 SCGB2A2Q13296 93 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 GAMTQ14353 236 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 FAM74A1Q5RGS3 127 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 BTNL8Q6UX41 500 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 RNF141Q8WVD5 230 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
C9orf3-220ENST00000489318 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
C9orf3-220ENST00000489318 LINC01548A6NM66 108 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 K7EIM0 57 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 CYB5BO43169 146 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 SRP14P37108 136 aaKnown RBP9.02□□□□□ -0.97
C9orf3-220ENST00000489318 AKR1C1Q04828 323 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 TEPPQ6URK8 271 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 SLC35E3Q7Z769 313 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 SIGLECL1Q8N7X8 197 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 THAP8Q8NA92 274 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 TMEM116Q8NCL8 245 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 SLC35E1Q96K37 410 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 MGST2Q99735 147 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 KCNIP2Q9NS61 270 aa9.02□□□□□ -0.97
C9orf3-220ENST00000489318 TRBV9A0A0B4J1U6 114 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 C17orf112F2Z3M2 114 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 CLDN34H7C241 214 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 TRIM77I1YAP6 450 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 AP4M1O00189 453 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 LY6G6DO95868 133 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 MT-CO2P00403 227 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 HIST1H1BP16401 226 aaKnown RBP9.01□□□□□ -0.97
C9orf3-220ENST00000489318 BLCAPP62952 87 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 CFHR3Q02985 330 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 ECSCRQ19T08 205 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 UNQ5815/PRO19632Q6UWF5 114 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 DPPA3Q6W0C5 159 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 SAT2Q96F10 170 aaPredicted RBP9.01□□□□□ -0.97
C9orf3-220ENST00000489318 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 MRPL36Q9P0J6 103 aaKnown RBP9.01□□□□□ -0.97
C9orf3-220ENST00000489318 RFNGQ9Y644 331 aa9.01□□□□□ -0.97
C9orf3-220ENST00000489318 ANK3Q12955 4377 aaKnown RBP9.01□□□□□ -0.97
C9orf3-220ENST00000489318 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
C9orf3-220ENST00000489318 H3BUA1 57 aa9□□□□□ -0.97
C9orf3-220ENST00000489318 DEFA4P12838 97 aa9□□□□□ -0.97
C9orf3-220ENST00000489318 PPIFP30405 207 aaKnown RBP9□□□□□ -0.97
C9orf3-220ENST00000489318 FCGR2BP31994 310 aaPredicted RBP9□□□□□ -0.97
C9orf3-220ENST00000489318 RPL29P47914 159 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms