RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 TSSK6Q9BXA6 273 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 ULBP1Q9BZM6 244 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 DERL2Q9GZP9 239 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 SLC25A31Q9H0C2 315 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 METTL8Q9H825 291 aaKnown RBP2.01□□□□□ -2.09
USP48-209ENST00000487880 ASCL3Q9NQ33 180 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 CISHQ9NSE2 258 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 C14orf105Q9NVL8 296 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 V9GYQ6 96 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 DOCK1Q14185 1865 aa2.01□□□□□ -2.09
USP48-209ENST00000487880 COL18A1P39060 1754 aa2□□□□□ -2.09
USP48-209ENST00000487880 DSPPQ9NZW4 1301 aa2□□□□□ -2.09
USP48-209ENST00000487880 ZNF638Q14966 1978 aaKnown RBP2□□□□□ -2.09
USP48-209ENST00000487880 TRBV24-1A0A075B6N3 115 aa2□□□□□ -2.09
USP48-209ENST00000487880 A0A087WUJ7 227 aa2□□□□□ -2.09
USP48-209ENST00000487880 A0A1B0GV90 55 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR5H14A6NHG9 310 aa2□□□□□ -2.09
USP48-209ENST00000487880 LRRN3E7EW58 273 aa2□□□□□ -2.09
USP48-209ENST00000487880 H3BP45 60 aa2□□□□□ -2.09
USP48-209ENST00000487880 M0QXV9 152 aa2□□□□□ -2.09
USP48-209ENST00000487880 FGF16O43320 207 aa2□□□□□ -2.09
USP48-209ENST00000487880 SSNA1O43805 119 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR2T1O43869 369 aa2□□□□□ -2.09
USP48-209ENST00000487880 CREBL2O60519 120 aaPredicted RBP2□□□□□ -2.09
USP48-209ENST00000487880 RAB36O95755 333 aa2□□□□□ -2.09
USP48-209ENST00000487880 GPR75O95800 540 aa2□□□□□ -2.09
USP48-209ENST00000487880 CD2P06729 351 aa2□□□□□ -2.09
USP48-209ENST00000487880 SLC25A4P12235 298 aa2□□□□□ -2.09
USP48-209ENST00000487880 GPX2P18283 190 aa2□□□□□ -2.09
USP48-209ENST00000487880 CXCL3P19876 107 aa2□□□□□ -2.09
USP48-209ENST00000487880 S100A2P29034 98 aa2□□□□□ -2.09
USP48-209ENST00000487880 DDTP30046 118 aa2□□□□□ -2.09
USP48-209ENST00000487880 KDELR2P33947 212 aa2□□□□□ -2.09
USP48-209ENST00000487880 RAB8AP61006 207 aa2□□□□□ -2.09
USP48-209ENST00000487880 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
USP48-209ENST00000487880 BAXQ07812 192 aa2□□□□□ -2.09
USP48-209ENST00000487880 FABP9Q0Z7S8 132 aa2□□□□□ -2.09
USP48-209ENST00000487880 HTR4Q13639 388 aa2□□□□□ -2.09
USP48-209ENST00000487880 SLC36A2Q495M3 483 aa2□□□□□ -2.09
USP48-209ENST00000487880 TMEM244Q5VVB8 128 aa2□□□□□ -2.09
USP48-209ENST00000487880 CLEC6AQ6EIG7 209 aa2□□□□□ -2.09
USP48-209ENST00000487880 ZBTB8OSQ8IWT0 167 aa2□□□□□ -2.09
USP48-209ENST00000487880 KCNRGQ8N5I3 272 aa2□□□□□ -2.09
USP48-209ENST00000487880 ZNF283Q8N7M2 679 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR10K1Q8NGX5 313 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR10A6Q8NH74 314 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR10J5Q8NHC4 309 aa2□□□□□ -2.09
USP48-209ENST00000487880 RNASEH2CQ8TDP1 164 aaKnown RBP2□□□□□ -2.09
USP48-209ENST00000487880 HAVCR2Q8TDQ0 301 aa2□□□□□ -2.09
USP48-209ENST00000487880 SMIM4Q8WVI0 70 aa2□□□□□ -2.09
USP48-209ENST00000487880 TEX37Q96LM6 180 aa2□□□□□ -2.09
USP48-209ENST00000487880 DOHHQ9BU89 302 aa2□□□□□ -2.09
USP48-209ENST00000487880 SUCNR1Q9BXA5 334 aa2□□□□□ -2.09
USP48-209ENST00000487880 DPY30Q9C005 99 aa2□□□□□ -2.09
USP48-209ENST00000487880 CHST5Q9GZS9 411 aa2□□□□□ -2.09
USP48-209ENST00000487880 ARL6Q9H0F7 186 aa2□□□□□ -2.09
USP48-209ENST00000487880 HDHD2Q9H0R4 259 aa2□□□□□ -2.09
USP48-209ENST00000487880 OR52A5Q9H2C5 316 aa2□□□□□ -2.09
USP48-209ENST00000487880 MFSD1Q9H3U5 465 aa2□□□□□ -2.09
USP48-209ENST00000487880 SMDT1Q9H4I9 107 aa2□□□□□ -2.09
USP48-209ENST00000487880 METTL17Q9H7H0 456 aaPredicted RBP2□□□□□ -2.09
USP48-209ENST00000487880 MS4A12Q9NXJ0 267 aa2□□□□□ -2.09
USP48-209ENST00000487880 ABRACLQ9P1F3 81 aa2□□□□□ -2.09
USP48-209ENST00000487880 ZNF337Q9Y3M9 751 aa2□□□□□ -2.09
USP48-209ENST00000487880 SORL1Q92673 2214 aa2□□□□□ -2.09
USP48-209ENST00000487880 NUP98P52948 1817 aa2□□□□□ -2.09
USP48-209ENST00000487880 KMT2EQ8IZD2 1858 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 IGHV2-26A0A0B4J1V2 119 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TRAV1-2A0A0B4J238 106 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 GNG14A0A1W2PPG7 69 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 KANTRA0A1W2PQU2 76 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 A8MWP6 167 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 GABARAPH6UMI1 98 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 M0QYV0 167 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 GPR31O00270 319 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 DLEU1O43261 78 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ENSAO43768 121 aaKnown RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 MFSD11O43934 449 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 PDCD6O75340 191 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 IL3P08700 152 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 LINC00032P0C843 101 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 CD79AP11912 226 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TPT1P13693 172 aaKnown RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 FGF7P21781 194 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 FAUP35544 74 aaKnown RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 CARD18P57730 90 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 SMIM11AP58511 58 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TPI1P60174 286 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 SELENOWP63302 87 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 RHEBQ15382 184 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ZNHIT3Q15649 155 aaPredicted RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 TNXAQ16473 311 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 PYY3Q5JQD4 70 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 FAM74A1Q5RGS3 127 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 C9orf64Q5T6V5 341 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 HENMT1Q5T8I9 393 aaKnown RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 C12orf73Q69YU5 71 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ALKAL2Q6UX46 152 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TMEM91Q6ZNR0 172 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 MSRB3Q8IXL7 192 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms