RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ZC4H2Q9NQZ6 224 aa13.86□□□□□ -0.19
COL1A1-207ENST00000486572 OR2T8A6NH00 312 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 TGOLN2O43493 480 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 NDUFB6O95139 128 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 SULT1A3P0DMM9 295 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 SULT1A4P0DMN0 295 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 FAM106AQ4KMX7 169 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 NMSQ5H8A3 153 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 LYZL2Q7Z4W2 148 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 BSCL2Q96G97 398 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-207ENST00000486572 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
COL1A1-207ENST00000486572 DUXBA0A1W2PPF3 345 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 I3L2K1 104 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 GP9P14770 177 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL1A1-207ENST00000486572 UBE2MP61081 183 aaKnown RBP13.84□□□□□ -0.19
COL1A1-207ENST00000486572 PPP1R1AQ13522 171 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 SPSB3Q6PJ21 355 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 UBAC2Q8NBM4 344 aa13.84□□□□□ -0.19
COL1A1-207ENST00000486572 GAR1Q9NY12 217 aaKnown RBP13.84□□□□□ -0.19
COL1A1-207ENST00000486572 ZNF320A2RRD8 509 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 C2orf70A6NJV1 201 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 A8MWP6 167 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-207ENST00000486572 SFT2D2O95562 160 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 MT-CO2P00403 227 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 RNASE2P10153 161 aaKnown RBP13.83□□□□□ -0.2
COL1A1-207ENST00000486572 BTCP35070 178 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 SMCO1Q147U7 214 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 ANKRD55Q3KP44 614 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 Q56UQ5 140 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 LRTM2Q8N967 370 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
COL1A1-207ENST00000486572 CCDC32Q9BV29 185 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
COL1A1-207ENST00000486572 CORTO00230 105 aa13.82□□□□□ -0.2
COL1A1-207ENST00000486572 PVRIGQ6DKI7 326 aa13.82□□□□□ -0.2
COL1A1-207ENST00000486572 LCN12Q6JVE5 192 aa13.82□□□□□ -0.2
COL1A1-207ENST00000486572 ADAMTSL5Q6ZMM2 481 aa13.82□□□□□ -0.2
COL1A1-207ENST00000486572 S100ZQ8WXG8 99 aa13.82□□□□□ -0.2
COL1A1-207ENST00000486572 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-207ENST00000486572 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-207ENST00000486572 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
COL1A1-207ENST00000486572 IGHV3-35A0A0C4DH35 117 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 TMEM213A2RRL7 107 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 CEBPZOSA8MTT3 80 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 NXPH3O95157 252 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 FOLR2P14207 255 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 FCGR2BP31994 310 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-207ENST00000486572 MFAP4P55083 255 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 BSXQ3C1V8 233 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 UNQ9165/PRO28630Q6UXU0 137 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 OR2K2Q8NGT1 345 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 TXN2Q99757 166 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 CHRDL1Q9BU40 450 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 PALMDQ9NP74 551 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 BATF3Q9NR55 127 aa13.81□□□□□ -0.2
COL1A1-207ENST00000486572 SORL1Q92673 2214 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 A0A1B0GU03 582 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 PLA2G10O15496 165 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 LYRM1O43325 122 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 EDN2P20800 178 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 ADMP35318 185 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 HTR2BP41595 481 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 TNFRSF9Q07011 255 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 TMEM190Q8WZ59 177 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 HSPB7Q9UBY9 170 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 FLVCR2Q9UPI3 526 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 UFC1Q9Y3C8 167 aa13.8□□□□□ -0.2
COL1A1-207ENST00000486572 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 NDUFA4O00483 81 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
COL1A1-207ENST00000486572 IGHV3-48P01763 117 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 CTSGP08311 255 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 CBLN1P23435 193 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 CACNG8Q8WXS5 425 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 HIPK2Q9H2X6 1198 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 TECRQ9NZ01 308 aaKnown RBP13.79□□□□□ -0.2
COL1A1-207ENST00000486572 TMED3Q9Y3Q3 217 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 SMAD5-AS1Q9Y6J3 95 aa13.79□□□□□ -0.2
COL1A1-207ENST00000486572 GNG7O60262 68 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 OR4E1P0C645 316 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 OPRK1P41145 380 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 ELLP55199 621 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-207ENST00000486572 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-207ENST00000486572 CD300EQ496F6 205 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-207ENST00000486572 TM4SF20Q53R12 229 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 C2orf83Q53S99 150 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 MARC2Q969Z3 335 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 B9D2Q9BPU9 175 aa13.78□□□□□ -0.2
COL1A1-207ENST00000486572 IZUMO1RA6ND01 250 aa13.77□□□□□ -0.21
COL1A1-207ENST00000486572 SLC25A6P12236 298 aa13.77□□□□□ -0.21
COL1A1-207ENST00000486572 ANXA7P20073 488 aaKnown RBP13.77□□□□□ -0.21
COL1A1-207ENST00000486572 NPBWR1P48145 328 aa13.77□□□□□ -0.21
COL1A1-207ENST00000486572 CD69Q07108 199 aa13.77□□□□□ -0.21
COL1A1-207ENST00000486572 DHRS2Q13268 280 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms