RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PHYHIPQ92561 330 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 LSM10Q969L4 123 aaKnown RBP10.44□□□□□ -0.74
U2AF1-211ENST00000486519 RAB3CQ96E17 227 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 SLC35B3Q9H1N7 401 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 CCL28Q9NRJ3 127 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 ARGLU1Q9NWB6 273 aaPredicted RBP10.44□□□□□ -0.74
U2AF1-211ENST00000486519 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 ORC6Q9Y5N6 252 aa10.44□□□□□ -0.74
U2AF1-211ENST00000486519 PKHD1L1Q86WI1 4243 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 TMEM272A0A1B0GTI8 110 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 A0A1W2PPQ1 181 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 FAM90A26D6RGX4 464 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 SLC17A2O00624 439 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 FCGR1AP12314 374 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 HLA-DRB4P13762 266 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 GCSHP23434 173 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 TAS2R31P59538 309 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 OGFRL1Q5TC84 451 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-211ENST00000486519 Q6ZS49 121 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 TXN2Q99757 166 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 PLGRKTQ9HBL7 147 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 AK6Q9Y3D8 172 aaKnown RBP10.43□□□□□ -0.74
U2AF1-211ENST00000486519 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
U2AF1-211ENST00000486519 A0A087WTM6 91 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 DENRO43583 198 aaKnown RBP10.42□□□□□ -0.74
U2AF1-211ENST00000486519 CD1AP06126 327 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 NQO2P16083 231 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 NPPCP23582 126 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 CRYBB3P26998 211 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 ERVFC1-1P60608 527 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 GNGT1P63211 74 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 ESRGQ1W209 222 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 C2orf76Q3KRA6 126 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 THOC7Q6I9Y2 204 aaKnown RBP10.42□□□□□ -0.74
U2AF1-211ENST00000486519 ZNF600Q6ZNG1 722 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 DMBX1Q8NFW5 382 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 OR1P1Q8NH06 330 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 PINX1Q96BK5 328 aaKnown RBP10.42□□□□□ -0.74
U2AF1-211ENST00000486519 TMEM231Q9H6L2 316 aa10.42□□□□□ -0.74
U2AF1-211ENST00000486519 MRPL36Q9P0J6 103 aaKnown RBP10.42□□□□□ -0.74
U2AF1-211ENST00000486519 LOC100130705A0A1B0GUX0 176 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 HBE1P02100 147 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 PTHLHP12272 177 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 HIST1H1DP16402 221 aaKnown RBP10.41□□□□□ -0.74
U2AF1-211ENST00000486519 GNRHRP30968 328 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 RAB11BQ15907 218 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 DNAL1Q4LDG9 190 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 HSD17B13Q7Z5P4 300 aaPredicted RBP10.41□□□□□ -0.74
U2AF1-211ENST00000486519 DEFB104AQ8WTQ1 72 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 MOB3AQ96BX8 217 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 TMEM80Q96HE8 168 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
U2AF1-211ENST00000486519 SLC22A5O76082 557 aa10.4□□□□□ -0.74
U2AF1-211ENST00000486519 HPRT1P00492 218 aa10.4□□□□□ -0.74
U2AF1-211ENST00000486519 HSD17B12Q53GQ0 312 aa10.4□□□□□ -0.74
U2AF1-211ENST00000486519 OR10R2Q8NGX6 335 aa10.4□□□□□ -0.74
U2AF1-211ENST00000486519 GLMPQ8WWB7 406 aa10.4□□□□□ -0.74
U2AF1-211ENST00000486519 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
U2AF1-211ENST00000486519 P0C879 139 aa10.39□□□□□ -0.75
U2AF1-211ENST00000486519 SSX1Q16384 188 aa10.39□□□□□ -0.75
U2AF1-211ENST00000486519 RRN3P1Q2M238 152 aa10.39□□□□□ -0.75
U2AF1-211ENST00000486519 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
U2AF1-211ENST00000486519 A0A1W2PS18 150 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 ZNF705GA8MUZ8 300 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-211ENST00000486519 EREGO14944 169 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 TMEM50AO95807 157 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 FGF2P09038 288 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 UCHL1P09936 223 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 OR51H1Q8NH63 302 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 METTL26Q96S19 204 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 FNDC4Q9H6D8 234 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-211ENST00000486519 U3KQE9 123 aa10.38□□□□□ -0.75
U2AF1-211ENST00000486519 TALDO1P37837 337 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 RASSF2P50749 326 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 KRTAP10-4P60372 401 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-211ENST00000486519 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 HES5Q5TA89 166 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 PYDC1Q8WXC3 89 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 C7orf50Q9BRJ6 194 aaKnown RBP10.37□□□□□ -0.75
U2AF1-211ENST00000486519 AIFM2Q9BRQ8 373 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 MRPS16Q9Y3D3 137 aaKnown RBP10.37□□□□□ -0.75
U2AF1-211ENST00000486519 GOLT1BQ9Y3E0 138 aa10.37□□□□□ -0.75
U2AF1-211ENST00000486519 EFCAB10A6NFE3 127 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 MARCH11A6NNE9 402 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 M0QYG6 137 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 ATP8B1O43520 1251 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 PLA2G1BP04054 148 aaKnown RBP10.36□□□□□ -0.75
U2AF1-211ENST00000486519 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
U2AF1-211ENST00000486519 PLEKHA2Q9HB19 425 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms