RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MED6O75586 246 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 IFNA10P01566 189 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 CTRB1P17538 263 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
COPS3-208ENST00000486032 BCAP31P51572 246 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 VAMP2P63027 116 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 TNFRSF9Q07011 255 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 RAB32Q13637 225 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 AKIRIN2Q53H80 203 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 SPANXN5Q5MJ07 72 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 ZNF429Q86V71 674 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 MRPL41Q8IXM3 137 aaKnown RBP4.39□□□□□ -1.71
COPS3-208ENST00000486032 TTC9CQ8N5M4 171 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 OR4D5Q8NGN0 318 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 OR5M8Q8NGP6 311 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 DTD1Q8TEA8 209 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 TMEM68Q96MH6 324 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 P2RX4Q99571 388 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 CITED2Q99967 270 aaPredicted RBP4.39□□□□□ -1.71
COPS3-208ENST00000486032 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 FBXL7Q9UJT9 491 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 ZNF257Q9Y2Q1 563 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
COPS3-208ENST00000486032 NPIPB5A8MRT5 1133 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 SYNGR2O43760 224 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 PITX3O75364 302 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 NDUFB8O95169 186 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 IGHG4P01861 327 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 MBPP02686 304 aaPredicted RBP4.38□□□□□ -1.71
COPS3-208ENST00000486032 IFNA4P05014 189 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 ELANEP08246 267 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 SLC25A6P12236 298 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 CXCL3P19876 107 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 NPY1RP25929 384 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 RAB9AP51151 201 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 CRIP2P52943 208 aaPredicted RBP4.38□□□□□ -1.71
COPS3-208ENST00000486032 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.712e-14■■■■■ 68.6
COPS3-208ENST00000486032 RRAS2P62070 204 aaPredicted RBP4.38□□□□□ -1.71
COPS3-208ENST00000486032 RHOGP84095 191 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 CFHR3Q02985 330 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 TCTEX1D4Q5JR98 221 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 C18orf65Q6ZTR6 163 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 HSD17B13Q7Z5P4 300 aaPredicted RBP4.38□□□□□ -1.71
COPS3-208ENST00000486032 CADM3Q8N126 398 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 UBAC2Q8NBM4 344 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 KLHL30-AS1Q8NEE0 82 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 SLC24A4Q8NFF2 622 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 OR52E5Q8NH55 327 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 DUX3Q96PT4 197 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 ZC4H2Q9NQZ6 224 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
COPS3-208ENST00000486032 F11RQ9Y624 299 aaKnown RBP4.38□□□□□ -1.71
COPS3-208ENST00000486032 A0A1B0GVG6 124 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 FAM24AA6NFZ4 105 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 FAM90A26D6RGX4 464 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 K7EPK0 472 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 CYB5BO43169 146 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 MT-CO2P00403 227 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 RLN2P04090 185 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 CRYGCP07315 174 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 OR8U8P0C7N1 319 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 PVALBP20472 110 aaPredicted RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 PSMB8P28062 276 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 OPRK1P41145 380 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 HTR2BP41595 481 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 CAV2P51636 162 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 MFAP2P55001 183 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 H2BFSP57053 126 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 RPL23AP62750 156 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 RPP30P78346 268 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 CD83Q01151 205 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 FOXE3Q13461 319 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 EXOSC2Q13868 293 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 DEFB136Q30KP8 78 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 C15orf32Q32M92 178 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 Q56UQ5 140 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 OR8G2PQ6IF36 304 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 ACSM6Q6P461 480 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 Q6ZNX1 250 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 COMMD1Q8N668 190 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 OR11H7Q8NGC8 314 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 SRSF8Q9BRL6 282 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 SLA2Q9H6Q3 261 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 GNB4Q9HAV0 340 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 THYN1Q9P016 225 aa4.37□□□□□ -1.71
COPS3-208ENST00000486032 STRAPQ9Y3F4 350 aaKnown RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 TSSC4Q9Y5U2 329 aaPredicted RBP4.37□□□□□ -1.71
COPS3-208ENST00000486032 IGLV11-55A0A075B6I3 123 aa4.36□□□□□ -1.71
COPS3-208ENST00000486032 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
COPS3-208ENST00000486032 A0A0G2JLM5 398 aa4.36□□□□□ -1.71
COPS3-208ENST00000486032 SMCO3A2RU48 225 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms