RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 MFAP2P55001 183 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 UBE2MP61081 183 aaKnown RBP9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 AARDQ4LEZ3 155 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 GPHB5Q86YW7 130 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 CCDC140Q96MF4 163 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 ATP6V0BQ99437 205 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 PTTG2Q9NZH5 202 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 PEMTQ9UBM1 199 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 CACNG5Q9UF02 275 aa9.15□□□□□ -0.94
HLA-DOA-204ENST00000485901 DUXBA0A1W2PPF3 345 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 PLA2G10O15496 165 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 OR2C1O95371 312 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 SULT1A3P0DMM9 295 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 SULT1A4P0DMN0 295 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 HOXA1P49639 335 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 FAM106AQ4KMX7 169 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 PLET1Q6UQ28 207 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 SCARB1Q8WTV0 552 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 GAR1Q9NY12 217 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 C21orf62Q9NYP8 219 aa9.14□□□□□ -0.95
HLA-DOA-204ENST00000485901 A0A1B0GU03 582 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 K7EIM0 57 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 LGALS9O00182 355 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 LYRM1O43325 122 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 HLA-AP01891 365 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 LYL1P12980 280 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 PPP1R1AQ13522 171 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 NMSQ5H8A3 153 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 IL34Q6ZMJ4 242 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 PRR25Q96S07 402 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 LYSTQ99698 3801 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 WDR12Q9GZL7 423 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 ZMAT4Q9H898 229 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 SIGLEC8Q9NYZ4 499 aa9.13□□□□□ -0.95
HLA-DOA-204ENST00000485901 IGHV3-21A0A0B4J1V1 117 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 LCE6AA0A183 80 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 ZNF320A2RRD8 509 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 CEBPZOSA8MTT3 80 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 I3L2K1 104 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 CORTO00230 105 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 MT-CO2P00403 227 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 CSN3P07498 182 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 GPR183P32249 361 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 BTCP35070 178 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 HTR2BP41595 481 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 MFAP4P55083 255 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 ZNF846Q147U1 533 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 SPSB3Q6PJ21 355 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 BSCL2Q96G97 398 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 CITED4Q96RK1 184 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 TXN2Q99757 166 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 HIPK2Q9H2X6 1198 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 HEYLQ9NQ87 328 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 FLVCR2Q9UPI3 526 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 TMED3Q9Y3Q3 217 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
HLA-DOA-204ENST00000485901 C9orf170A2RU37 121 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 OR2T8A6NH00 312 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 TGOLN2O43493 480 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 LY86O95711 162 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 IGLV1-51P01701 117 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 OR4E1P0C645 316 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 SLC25A6P12236 298 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 Q56UQ5 140 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 PVRIGQ6DKI7 326 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 NOXA1Q86UR1 476 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 UBAC2Q8NBM4 344 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 OR1S1Q8NH92 325 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 PALMDQ9NP74 551 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 ZC4H2Q9NQZ6 224 aa9.11□□□□□ -0.95
HLA-DOA-204ENST00000485901 RYR2Q92736 4967 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 A8MZ25 164 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 TCRBP04435 133 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 SPNP16150 400 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 BSXQ3C1V8 233 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 C4orf46Q504U0 113 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 MZT2BQ6NZ67 158 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 LYG2Q86SG7 212 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 DUSP18Q8NEJ0 188 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 COQ8AQ8NI60 647 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 ASCL2Q99929 193 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 ZNF436Q9C0F3 470 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
HLA-DOA-204ENST00000485901 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms