RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 DEDDO75618 318 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 MOSP00540 346 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 PMP2P02689 132 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 SEC11BP0C7V7 166 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 PSG2P11465 335 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 ZNF708P17019 499 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 KLK2P20151 261 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 AZU1P20160 251 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 AMTP48728 403 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 FABP6P51161 128 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 GPM6AP51674 278 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 UBE2E1P51965 193 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 OR1D5P58170 312 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 LY6DQ14210 128 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 KISS1Q15726 138 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 CEACAM16Q2WEN9 425 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 MORN2Q502X0 79 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 LDLRAD2Q5SZI1 272 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 Q6ZS49 121 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 Q6ZS52 159 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 UBALD2Q8IYN6 164 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 H1FOOQ8IZA3 346 aaPredicted RBP3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 LYG1Q8N1E2 194 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 PNKDQ8N490 385 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 FAM71E2Q8N5Q1 922 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 C11orf42Q8N5U0 333 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 OR11H6Q8NGC7 330 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 PRSS3P2Q8NHM4 247 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 VN1R17PQ8TDU5 208 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 ZNF418Q8TF45 676 aaPredicted RBP3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 HIST1H2BAQ96A08 127 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 MALSU1Q96EH3 234 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 ARHGAP5-AS1Q96IT6 56 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 ABHD14BQ96IU4 210 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 SLC25A33Q9BSK2 321 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 EMC6Q9BV81 110 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 SCRT1Q9BWW7 348 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 NAT8BQ9UHF3 227 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 MCTS1Q9ULC4 181 aaKnown RBP3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 PKIGQ9Y2B9 76 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 CACNA1AO00555 2505 aa3.24□□□□□ -1.89
PRPF38B-205ENST00000485810 CHD7Q9P2D1 2997 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CHD9Q3L8U1 2897 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 PCNX3Q9H6A9 2034 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 TRAV38-1A0A0B4J264 116 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 COLCA2A8K830 154 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ZNF705EA8MWA4 302 aaPredicted RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ZNF587BE7ETH6 402 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 J3QR89 54 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 RER1O15258 196 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 RBFOX2O43251 390 aaKnown RBP eCLIP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CRLF1O75462 422 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 MMP23AO75900 390 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 NRASP01111 189 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CSN2P05814 226 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 BCL3P20749 454 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CRYGSP22914 178 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CA6P23280 308 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 RBMXP38159 391 aaKnown RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 HNRNPA3P51991 378 aaKnown RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 TNFAIP6P98066 277 aaPredicted RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 HIST1H1AQ02539 215 aaPredicted RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ARFRP1Q13795 201 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ENDOGQ14249 297 aaKnown RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 RSPO1Q2MKA7 263 aaPredicted RBP3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 DEFB133Q30KQ1 61 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 FAM27BQ5VT28 67 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 Q6ZVQ6 151 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 MOB1BQ7L9L4 216 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 OR8I2Q8N0Y5 310 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 GAPTQ8N292 157 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 SLC25A45Q8N413 288 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 NRACQ8N912 160 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 OR1J1Q8NGS3 322 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 FNDC9Q8TBE3 224 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 BLNKQ8WV28 456 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 NABP1Q96AH0 204 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CLDN23Q96B33 292 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 DNAJA3Q96EY1 480 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 NDFIP1Q9BT67 221 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 SNHG12Q9BXW3 62 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 IFI27L2Q9H2X8 130 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 C11orf1Q9H5F2 150 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 Q9HAA7 133 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 SMCO4Q9NRQ5 59 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 ASF1BQ9NVP2 202 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 EHFQ9NZC4 300 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 KCNIP1Q9NZI2 227 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 OR5AC2Q9NZP5 309 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 CACFD1Q9UGQ2 172 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 PCDH15Q96QU1 1955 aa3.23□□□□□ -1.89
PRPF38B-205ENST00000485810 TDRD6O60522 2096 aaKnown RBP3.22□□□□□ -1.89
PRPF38B-205ENST00000485810 BRWD1Q9NSI6 2320 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms