RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CKLFQ9UBR5 152 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 AK3Q9UIJ7 227 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 PUS1Q9Y606 427 aaKnown RBP eCLIP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 A0A087WTM6 91 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 IGLC7A0M8Q6 106 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 HMGB1P1B2RPK0 211 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 TRDCB7Z8K6 153 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 J3QRK9 145 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 HLA-GP17693 338 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 SRMP19623 302 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 GNRHRP30968 328 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 FGF9P31371 208 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 SERPINB10P48595 397 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 FXYD7P58549 80 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 RPL8P62917 257 aaKnown RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 RELQ04864 619 aaPredicted RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 MRPL28Q13084 256 aaKnown RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 IGSF11Q5DX21 431 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 PSMG4Q5JS54 123 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 PUSL1Q8N0Z8 303 aaKnown RBP3.64□□□□□ -1.83
PTPN4-210ENST00000485247 OR10W1Q8NGF6 305 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 OR10J5Q8NHC4 309 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 GGHQ92820 318 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 GRAMD2BQ96HH9 432 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 TMEM70Q9BUB7 260 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 VSIRQ9H7M9 311 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 MGAT4AQ9UM21 535 aa3.64□□□□□ -1.83
PTPN4-210ENST00000485247 RHODO00212 210 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 CYB5BO43169 146 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 IGKV3-20P01619 116 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 DEFB130BP0DP73 79 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 DEFB130AP0DP74 79 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 RPL30P62888 115 aaKnown RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 KCTD9Q7L273 389 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 GDPD1Q8N9F7 314 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 CCDC124Q96CT7 223 aaKnown RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 LGALS12Q96DT0 336 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 NRBF2Q96F24 287 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 MYCBPQ99417 103 aaPredicted RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 GINS3Q9BRX5 216 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 TMEM59Q9BXS4 323 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 KCNK15Q9H427 330 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 HRASLSQ9HDD0 168 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 C12orf4Q9NQ89 552 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 EXOGQ9Y2C4 368 aaKnown RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 MRPS7Q9Y2R9 242 aaKnown RBP3.63□□□□□ -1.83
PTPN4-210ENST00000485247 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
PTPN4-210ENST00000485247 TRBV6-7A0A0A0MS04 114 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 A0A0A6YYD4 124 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 H3BMM0 161 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 K7EIM0 57 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 SOCS1O15524 211 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 FABP7O15540 132 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 FKBP6O75344 327 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 GAS8-AS1O95177 125 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 HBE1P02100 147 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 SERPINE2P07093 398 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 OR13C7P0DN81 318 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 CELP19835 753 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 ALDH3B2P48448 385 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 TAS2R43P59537 309 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 WT1-ASQ06250 92 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 ESRGQ1W209 222 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 RRN3P1Q2M238 152 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 Q499Y3 187 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 OGFRL1Q5TC84 451 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-210ENST00000485247 KDM4DQ6B0I6 523 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 RPL22L1Q6P5R6 122 aaKnown RBP3.62□□□□□ -1.83
PTPN4-210ENST00000485247 TOMM20LQ6UXN7 152 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 OR4A4PQ8NGN8 299 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 DCANP1Q8TF63 244 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 RNF125Q96EQ8 232 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 ATP6V0BQ99437 205 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 CIB1Q99828 191 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 CMSS1Q9BQ75 279 aaKnown RBP3.62□□□□□ -1.83
PTPN4-210ENST00000485247 C7orf50Q9BRJ6 194 aaKnown RBP3.62□□□□□ -1.83
PTPN4-210ENST00000485247 GINS4Q9BRT9 223 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 UPK3BQ9BT76 320 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 COMMD5Q9GZQ3 224 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 NXF2Q9GZY0 626 aaKnown RBP3.62□□□□□ -1.83
PTPN4-210ENST00000485247 MAGT1Q9H0U3 335 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 LRP2P98164 4655 aa3.62□□□□□ -1.83
PTPN4-210ENST00000485247 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 IGLV5-52A0A0A0MRZ9 124 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 TRAV3A0A0B4J244 114 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 TRBV5-5A0A0J9YX44 114 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 HELTA6NFD8 242 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 G3V2T6 193 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 HRASP01112 189 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 IGHV3-48P01763 117 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 PRM2P04554 102 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 BRWD1-AS2P59051 145 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
PTPN4-210ENST00000485247 RPP30P78346 268 aaKnown RBP3.61□□□□□ -1.83
PTPN4-210ENST00000485247 DHRS2Q13268 280 aa3.61□□□□□ -1.83
PTPN4-210ENST00000485247 UNC119Q13432 240 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms