RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 FGL1Q08830 312 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 AKIRIN2Q53H80 203 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 PRSS54Q6PEW0 395 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 ZNF546Q86UE3 836 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 OR2C3Q8N628 320 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 LINC01006Q8NI28 216 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 TMEM170AQ8WVE7 144 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 RAB40CQ96S21 281 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 KLK15Q9H2R5 256 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 STRAPQ9Y3F4 350 aaKnown RBP5.03□□□□□ -1.6
HERC4-210ENST00000480158 DMRT1Q9Y5R6 373 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 ATRQ13535 2644 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 IGSF23A1L1A6 192 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 E5RGE8 158 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 TSPAN9O75954 239 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 OR2J3O76001 311 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 RNASE2P10153 161 aaKnown RBP5.03□□□□□ -1.6
HERC4-210ENST00000480158 CTRB1P17538 263 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 HTR2BP41595 481 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 PDLIM3Q53GG5 364 aaPredicted RBP5.03□□□□□ -1.6
HERC4-210ENST00000480158 CTRB2Q6GPI1 263 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 BSCL2Q96G97 398 aaPredicted RBP5.03□□□□□ -1.6
HERC4-210ENST00000480158 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
HERC4-210ENST00000480158 OR5B12Q96R08 314 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 SMIM3Q9BZL3 60 aa5.03□□□□□ -1.6
HERC4-210ENST00000480158 C2CD3Q4AC94 2353 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 PSMB11A5LHX3 300 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 C15orf62A8K5M9 175 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 BOLA2-SMG1P6H3BVE0 249 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 ZNF561-AS1K7EIQ3 104 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 OR8U8P0C7N1 319 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 RPL12P30050 165 aaKnown RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 OPRK1P41145 380 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 ZFP69Q49AA0 526 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 KHDC1LQ5JSQ8 128 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 ETV3LQ6ZN32 361 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 LURAP1LQ8IV03 231 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TCTE3Q8IZS6 198 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TTC9CQ8N5M4 171 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TMEM252Q8N6L7 170 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 KLHDC1Q8N7A1 406 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 UBAC2Q8NBM4 344 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 OR5AU1Q8NGC0 362 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 SMIM8Q96KF7 97 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 LYRM2Q9NU23 88 aaPredicted RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 ZFP57Q9NU63 452 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 CACFD1Q9UGQ2 172 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 RNF114Q9Y508 228 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 F11RQ9Y624 299 aaKnown RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 U3KQ87 197 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TENM1Q9UKZ4 2725 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 NPIPB5A8MRT5 1133 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 IGHV3-11P01762 117 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TRGV3P03979 118 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 PPIFP30405 207 aaKnown RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 EIF2B2P49770 351 aaKnown RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 SUB1P53999 127 aaKnown RBP eCLIP5.02□□□□□ -1.61
HERC4-210ENST00000480158 TPPP2P59282 170 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 RHOGP84095 191 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 CLINT1Q14677 625 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 TMEM65Q6PI78 240 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 HSD17B13Q7Z5P4 300 aaPredicted RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 Q8N2B8 174 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 INO80EQ8NBZ0 244 aaPredicted RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 FAM110DQ8TAY7 271 aaPredicted RBP5.02□□□□□ -1.61
HERC4-210ENST00000480158 C11orf1Q9H5F2 150 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 FBXL7Q9UJT9 491 aa5.02□□□□□ -1.61
HERC4-210ENST00000480158 A0A1W2PRX2 142 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 SMCO3A2RU48 225 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 MFSD2BA6NFX1 497 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 ATP6V1G1O75348 118 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 NDUFB8O95169 186 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 MT-CO2P00403 227 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 CRYGCP07315 174 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 HNRNPCP07910 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
HERC4-210ENST00000480158 HKR1P10072 659 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 P2RY1P47900 373 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 RAB11AP62491 216 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 RPP30P78346 268 aaKnown RBP5.01□□□□□ -1.61
HERC4-210ENST00000480158 SLC35B1P78383 322 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 EWSR1Q01844 656 aaKnown RBP eCLIP5.01□□□□□ -1.61
HERC4-210ENST00000480158 C15orf32Q32M92 178 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 KRTAP24-1Q3LI83 254 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 HAPLN4Q86UW8 402 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 STX12Q86Y82 276 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 OR1P1Q8NH06 330 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 OR4F5Q8NH21 305 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 ASB13Q8WXK3 278 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 PPP1R14BQ96C90 147 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 MFFQ9GZY8 342 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 MRPL18Q9H0U6 180 aaKnown RBP5.01□□□□□ -1.61
HERC4-210ENST00000480158 TSC22D2O75157 780 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 C1QBP02746 253 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 NUP62P37198 522 aaPredicted RBP5.01□□□□□ -1.61
HERC4-210ENST00000480158 RAB9AP51151 201 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 TAS2R30P59541 319 aa5.01□□□□□ -1.61
HERC4-210ENST00000480158 RPL15P61313 204 aaKnown RBP5.01□□□□□ -1.61
HERC4-210ENST00000480158 CFHR3Q02985 330 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms