RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 SPI1P17947 270 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 NFYAP23511 347 aaPredicted RBP1.42□□□□□ -2.18
VLDLR-204ENST00000478776 CRYBA4P53673 196 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 GNG3P63215 75 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 SS18Q15532 418 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 SNCBQ16143 134 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 RPP25LQ8N5L8 163 aaKnown RBP1.42□□□□□ -2.18
VLDLR-204ENST00000478776 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.42□□□□□ -2.18
VLDLR-204ENST00000478776 Q8NDZ9 215 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 OR51T1Q8NGJ9 327 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 OR13C6PQ8NH95 151 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 SLC25A40Q8TBP6 338 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 DNAJC30Q96LL9 226 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 CHST6Q9GZX3 395 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 CENPHQ9H3R5 247 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 TRABDQ9H4I3 376 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 BIN3Q9NQY0 253 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 NDUFB11Q9NX14 153 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 NAT8Q9UHE5 227 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 UTP11Q9Y3A2 253 aaKnown RBP1.42□□□□□ -2.18
VLDLR-204ENST00000478776 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
VLDLR-204ENST00000478776 SYNMO15061 1565 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 PBRM1Q86U86 1689 aa1.42□□□□□ -2.18
VLDLR-204ENST00000478776 FMN1Q68DA7 1419 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 MIA2Q96PC5 1412 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 ARHGAP32A7KAX9 2087 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 TRAV41A0A0B4J266 112 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 SDHAF1A6NFY7 115 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 IFNA7P01567 189 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 SMIM17P0DL12 118 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 IFI30P13284 250 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 ZNF80P51504 273 aaPredicted RBP1.41□□□□□ -2.18
VLDLR-204ENST00000478776 TCTAP57738 103 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 TAS2R41P59536 307 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 CDC42P60953 191 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 TERB2Q8NHR7 220 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 SH3BGRL3Q9H299 93 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 LYRM2Q9NU23 88 aaPredicted RBP1.41□□□□□ -2.18
VLDLR-204ENST00000478776 PRO2289Q9P1D8 64 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 SMPXQ9UHP9 88 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 PRNDQ9UKY0 176 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 SCN10AQ9Y5Y9 1956 aa1.41□□□□□ -2.18
VLDLR-204ENST00000478776 ZNF106Q9H2Y7 1883 aaKnown RBP1.4□□□□□ -2.19
VLDLR-204ENST00000478776 ADAMTS7Q9UKP4 1686 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 IGHV1-18A0A0C4DH31 117 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 TRBV10-2A0A0K0K1G8 114 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PPP5D1E7EU14 171 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 G3V2T6 193 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 TRAPPC2LH3BP13 241 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 AIPO00170 330 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 CIAO1O76071 339 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 NDUFC2O95298 119 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PPBPP02775 128 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 RPSAP08865 295 aaKnown RBP1.4□□□□□ -2.19
VLDLR-204ENST00000478776 CBR1P16152 277 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 RPS4Y1P22090 263 aaKnown RBP1.4□□□□□ -2.19
VLDLR-204ENST00000478776 CASP1P29466 404 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PHBP35232 272 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 ATP5G3P48201 142 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 FXYD2P54710 66 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PIGPP57054 158 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 YPEL3P61236 119 aaPredicted RBP1.4□□□□□ -2.19
VLDLR-204ENST00000478776 NCALDP61601 193 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 TSNQ15631 228 aaKnown RBP1.4□□□□□ -2.19
VLDLR-204ENST00000478776 KISS1Q15726 138 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 AKR1C8PQ5T2L2 129 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 LYRM7Q5U5X0 104 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 C3orf33Q6P1S2 294 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 LCA10Q71F78 164 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 MIR17HGQ75NE6 70 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 GRINAQ7Z429 371 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 SMIM20Q8N5G0 67 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PFN4Q8NHR9 129 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 C11orf40Q8WZ69 217 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 ZHX1-C8orf76Q96EF9 292 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 SCGB3A1Q96QR1 104 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 PCBD2Q9H0N5 130 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 CXCL16Q9H2A7 254 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 SLC39A9Q9NUM3 307 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 ERGIC3Q9Y282 383 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 UFC1Q9Y3C8 167 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 GREB1Q4ZG55 1949 aa1.4□□□□□ -2.19
VLDLR-204ENST00000478776 TONSLQ96HA7 1378 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 PLXND1Q9Y4D7 1925 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 A0A1B0GV72 72 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 CLDN25C9JDP6 229 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 FNDC10F2Z333 226 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 LY6LH3BQJ8 138 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 CSRP1P21291 193 aaKnown RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 SERPINB1P30740 379 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 HINT1P49773 126 aaPredicted RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 DEFA3P59666 94 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 RHOBP62745 196 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 SUPT4H1P63272 117 aaKnown RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 ERHP84090 104 aaKnown RBP1.39□□□□□ -2.19
VLDLR-204ENST00000478776 LINC01554Q52M75 96 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 FAM27BQ5VT28 67 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 SMIM15Q7Z3B0 74 aa1.39□□□□□ -2.19
VLDLR-204ENST00000478776 TRAPPC6BQ86SZ2 158 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms