RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 HSPE1P61604 102 aaKnown RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 TNFAIP6P98066 277 aaPredicted RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 HOXA4Q00056 320 aaPredicted RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 HNF4GQ14541 408 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 TBR1Q16650 682 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 RPL39P5Q59GN2 51 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 SPINK9Q5DT21 86 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 DNLZQ5SXM8 178 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 Q6ZSN1 163 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 SSX9Q7RTT3 188 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 SSX8Q7RTT4 187 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 Q8N7P7 452 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 ZNRF1Q8ND25 227 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 NUP37Q8NFH4 326 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 OR10A7Q8NGE5 316 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 IL17DQ8TAD2 202 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 FAM57AQ8TBR7 257 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 CORO2AQ92828 525 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 RPUSD4Q96CM3 377 aaKnown RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 GAFA1Q96PS6 74 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 LINC00574Q9H8X3 128 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 CHODLQ9H9P2 273 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 NPVFQ9HCQ7 196 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 GAR1Q9NY12 217 aaKnown RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 IDI2-AS1Q9NZ38 188 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 FOXA2Q9Y261 457 aaPredicted RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 NOTCH1P46531 2555 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 CADP27708 2225 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.762e-7■□□□□ 8.1
SF3B6-202ENST00000478050 SAA2-SAA4A0A096LPE2 208 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 hADV38S2A0JD32 116 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 A8MXE2 369 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 PPP5D1E7EU14 171 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 PHOX2AO14813 284 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 HMGB3O15347 200 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 SLC31A2O15432 143 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 GGCTO75223 188 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 CXorf1O96002 111 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 MT-CO2P00403 227 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV1-46P01743 117 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 STAG3L2P0CL84 134 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 STAG3L3P0CL85 134 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 SAA2P0DJI9 122 aaPredicted RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 BTF3P20290 206 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 BMP5P22003 454 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 NPY1RP25929 384 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF134P52741 427 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 FAM3BP58499 235 aaPredicted RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 LINC00205P59089 165 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 MRPS11P82912 194 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 RAB31Q13636 194 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 RTL8BQ17RB0 113 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 SPRNQ5BIV9 151 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 CT45A1Q5HYN5 189 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 TEX36Q5VZQ5 186 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 KCNIP4Q6PIL6 250 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF788Q6ZQV5 615 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 HIST3H2BBQ8N257 126 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 RBMXL3Q8N7X1 1067 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF439Q8NDP4 499 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 SLC24A4Q8NFF2 622 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 CT45A3Q8NHU0 189 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 GATAD1Q8WUU5 269 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 FRZBQ92765 325 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 IMMP2LQ96T52 175 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 MGST2Q99735 147 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 SSX3Q99909 188 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM204Q9BSN7 226 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 GGTLC1Q9BX51 225 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 GSN-AS1Q9NRJ2 163 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM14BQ9NUH8 114 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ELOVL5Q9NYP7 299 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 MIOXQ9UGB7 285 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 PITPNC1Q9UKF7 332 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 PRNDQ9UKY0 176 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF257Q9Y2Q1 563 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 LSM4Q9Y4Z0 139 aaKnown RBP4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ARL2-SNX15V9GYD0 113 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 ZGRF1Q86YA3 2104 aa4.03□□□□□ -1.76
SF3B6-202ENST00000478050 TRAV3A0A0B4J244 114 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TRAV38-1A0A0B4J264 116 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 MDFIC2A0A1B0GVS7 189 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 IFITM10A6NMD0 228 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 B9A039 149 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 UPK2O00526 184 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 RRHO14718 337 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 APOA2P02652 100 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 TYMSP04818 313 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 IL6RP08887 468 aaPredicted RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 ARL14EPLP0DKL9 152 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 GNLYP22749 145 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 RPL29P47914 159 aaKnown RBP4.02□□□□□ -1.77
SF3B6-202ENST00000478050 RHOBP62745 196 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 GNB1P62873 340 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 LCN2P80188 198 aa4.02□□□□□ -1.77
SF3B6-202ENST00000478050 MEF2CQ06413 473 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms