RNA–Protein interactions for RNA: ENST00000477814.5

HDAC10-212, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 1,784 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-212ENST00000477814 DEFA4P12838 97 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 CEBPGP53567 150 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 MIC13Q5XKP0 118 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 C20orf24Q9BUV8 137 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 TMPRSS5Q9H3S3 457 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 RPS10P5Q9NQ39 176 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 TBL2Q9Y4P3 447 aaKnown RBP16.34■□□□□ 0.21
HDAC10-212ENST00000477814 VPS13CQ709C8 3753 aa16.34■□□□□ 0.21
HDAC10-212ENST00000477814 MAP1AP78559 2803 aaPredicted RBP16.34■□□□□ 0.21
HDAC10-212ENST00000477814 TRAV20A0A0B4J274 112 aa16.33■□□□□ 0.21
HDAC10-212ENST00000477814 OOSP1A8MZH6 123 aa16.33■□□□□ 0.21
HDAC10-212ENST00000477814 TIMM23O14925 209 aa16.33■□□□□ 0.21
HDAC10-212ENST00000477814 HABP2Q14520 560 aaPredicted RBP16.33■□□□□ 0.21
HDAC10-212ENST00000477814 C10orf55Q5SWW7 151 aa16.33■□□□□ 0.21
HDAC10-212ENST00000477814 CFHR4Q92496 578 aa16.33■□□□□ 0.21
HDAC10-212ENST00000477814 PUS1Q9Y606 427 aaKnown RBP eCLIP16.33■□□□□ 0.21
HDAC10-212ENST00000477814 CRYGBP07316 175 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 ATF4P18848 351 aaPredicted RBP16.33■□□□□ 0.2
HDAC10-212ENST00000477814 GATA3P23771 443 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 WT1-ASQ06250 92 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 RAB31Q13636 194 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 RHEBQ15382 184 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 RNF5Q99942 180 aa16.33■□□□□ 0.2
HDAC10-212ENST00000477814 H3BQ15 152 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 CNTFRP26992 372 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 AKR1C3P42330 323 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 SSX2Q16385 188 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 CCDC144NLQ6NUI1 221 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 SSMEM1Q8WWF3 244 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 SMCO4Q9NRQ5 59 aa16.32■□□□□ 0.2
HDAC10-212ENST00000477814 VENTXO95231 258 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
HDAC10-212ENST00000477814 B2MP61769 119 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 PSG5Q15238 335 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 PRSS8Q16651 343 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 FAM90A2PQ658T7 463 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 TMEM144Q7Z5S9 345 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 MMD2Q8IY49 270 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 DYNAPQ8N1N2 210 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 MANBALQ9NQG1 85 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 FASNP49327 2511 aaKnown RBP16.31■□□□□ 0.2
HDAC10-212ENST00000477814 NBPF19A0A087WUL8 3843 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 LOC105371267A0A1B0GV96 52 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 A0A1W2PPV4 95 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 RNF223E7ERA6 249 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 TAGLN2P37802 199 aaKnown RBP16.31■□□□□ 0.2
HDAC10-212ENST00000477814 CD69Q07108 199 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 GAMTQ14353 236 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 TMEM249Q2WGJ8 235 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 SLC35E3Q7Z769 313 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 STPG3Q8N7X2 389 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 C17orf50Q8WW18 174 aa16.31■□□□□ 0.2
HDAC10-212ENST00000477814 CR1P17927 2039 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 CENPVL3A0A0U1RRI6 287 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 PAX6P26367 422 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 PSMB3P49720 205 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 MEF2BQ02080 365 aaPredicted RBP16.3■□□□□ 0.2
HDAC10-212ENST00000477814 MALSU1Q96EH3 234 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 Q96MF0 132 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 NIPSNAP3BQ9BS92 247 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 HIF1ANQ9NWT6 349 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 SIGLEC9Q9Y336 463 aa16.3■□□□□ 0.2
HDAC10-212ENST00000477814 GPX4P36969 197 aaPredicted RBP16.29■□□□□ 0.2
HDAC10-212ENST00000477814 CD81P60033 236 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PRR20EP86478 221 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PRR20CP86479 221 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PRR20DP86480 221 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PRR20BP86481 221 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PRR20AP86496 221 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 CACNG8Q8WXS5 425 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 AJUBAQ96IF1 538 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 PLXNB1O43157 2135 aa16.29■□□□□ 0.2
HDAC10-212ENST00000477814 MAS1LP35410 378 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 SUB1P53999 127 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC10-212ENST00000477814 MLANAQ16655 118 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 IQCF2Q8IXL9 164 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 GATAD1Q8WUU5 269 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 TVP23CQ96ET8 276 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 C7orf69Q9H7B7 122 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 SLC45A2Q9UMX9 530 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.28■□□□□ 0.29e-8■■□□□ 13.1
HDAC10-212ENST00000477814 IGKV1OR2-108A0A075B7D4 117 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 NPFFO15130 113 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 NDUFS6O75380 124 aaKnown RBP16.28■□□□□ 0.2
HDAC10-212ENST00000477814 SAA4P35542 130 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 TNXAQ16473 311 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 KRTAP1-3Q8IUG1 177 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 RNASEH2CQ8TDP1 164 aaKnown RBP16.28■□□□□ 0.2
HDAC10-212ENST00000477814 TUBA4BQ9H853 241 aa16.28■□□□□ 0.2
HDAC10-212ENST00000477814 METTL1Q9UBP6 276 aaKnown RBP16.28■□□□□ 0.2
HDAC10-212ENST00000477814 MOSP00540 346 aa16.27■□□□□ 0.2
HDAC10-212ENST00000477814 LINC00869P0C866 280 aa16.27■□□□□ 0.2
HDAC10-212ENST00000477814 STAG3L2P0CL84 134 aa16.27■□□□□ 0.2
HDAC10-212ENST00000477814 STAG3L3P0CL85 134 aa16.27■□□□□ 0.2
HDAC10-212ENST00000477814 RPL27AP46776 148 aaKnown RBP16.27■□□□□ 0.2
HDAC10-212ENST00000477814 PPP1R27Q86WC6 154 aa16.27■□□□□ 0.2
HDAC10-212ENST00000477814 IGLC7A0M8Q6 106 aa16.26■□□□□ 0.19
HDAC10-212ENST00000477814 COLCA2A8K830 154 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms